RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 AMFRQ9UKV5 643 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 CTNND2Q9UQB3 1225 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 NCKAP1Q9Y2A7 1128 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 DTX4Q9Y2E6 619 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 SAMHD1Q9Y3Z3 626 aaKnown RBP2.62□□□□□ -1.99
PRPF39-206ENST00000554429 PCDHA13Q9Y5I0 950 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 NFS1Q9Y697 457 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 MAD1L1Q9Y6D9 718 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 OAS3Q9Y6K5 1087 aaKnown RBP2.62□□□□□ -1.99
PRPF39-206ENST00000554429 NCOR2Q9Y618 2525 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 ACACBO00763 2458 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 CFAP54Q96N23 3096 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 PI4KAP42356 2102 aa2.62□□□□□ -1.99
PRPF39-206ENST00000554429 A0A1B0GTW7 788 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TCAF2A6NFQ2 919 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 GABRR3A8MPY1 467 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SMLR1H3BR10 107 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 WWP2O00308 870 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HNRNPDLO14979 420 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 FLRT2O43155 660 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 BUB1BO60566 1050 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 B4GALT2O60909 372 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 OR6B1O95007 311 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KLF8O95600 359 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LCATP04180 440 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 NTRK1P04629 796 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ATP1A1P05023 1023 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 YES1P07947 543 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PLEKP08567 350 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KRT19P08727 400 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 GNAO1P09471 354 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 EZRP15311 586 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SAT1P21673 171 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 UGT1A1P22309 533 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 NTSR1P30989 418 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CDKN1AP38936 164 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ECI1P42126 302 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 GSTM5P46439 218 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HK2P52789 917 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CDH8P55286 799 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CLDN8P56748 225 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TNNC1P63316 161 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SNTB1Q13884 538 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SGCBQ16585 318 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 WHAMMP3Q1A5X7 153 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SLC5A12Q1EHB4 618 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HNRNPA1L2Q32P51 320 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RAB41Q5JT25 222 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ARMC12Q5T9G4 340 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 WLSQ5T9L3 541 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF468Q5VIY5 522 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MLIPQ5VWP3 458 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 STEAP3Q658P3 488 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DUPD1Q68J44 220 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TCEAL6Q6IPX3 200 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ANO7Q6IWH7 933 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SARM1Q6SZW1 724 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TPGS1Q6ZTW0 290 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 BIVMQ86UB2 503 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 NAXDQ8IW45 347 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TIGD4Q8IY51 512 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ADGRF2Q8IZF7 708 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MCOLN2Q8IZK6 566 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HCAR2Q8TDS4 363 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PIGKQ92643 395 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TCEAL3Q969E4 200 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 C3orf49Q96BT1 292 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RNF31Q96EP0 1072 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DTD2Q96FN9 168 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MS4A14Q96JA4 679 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HSH2DQ96JZ2 352 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 C12orf66Q96MD2 445 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PGLYRP2Q96PD5 576 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DGAT2Q96PD7 388 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 OPALINQ96PE5 141 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 VPS35Q96QK1 796 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PAFAH2Q99487 392 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PKP2Q99959 881 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SYT15Q9BQS2 421 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ORAI3Q9BRQ5 295 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TUBB6Q9BUF5 446 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ADGRE3Q9BY15 652 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TRIM31Q9BZY9 425 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DDX47Q9H0S4 455 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 WDR55Q9H6Y2 383 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 L2HGDHQ9H9P8 463 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MAGEF1Q9HAY2 307 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SLC39A2Q9NP94 309 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TLR8Q9NR97 1041 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TMPRSS4Q9NRS4 437 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 NDUFA13Q9P0J0 144 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SLC24A2Q9UI40 661 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM59LQ9UK28 342 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KCNK6Q9Y257 313 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MRPS7Q9Y2R9 242 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RHBDD3Q9Y3P4 386 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TIMM13Q9Y5L4 95 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KCNE2Q9Y6J6 123 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CACNA1EQ15878 2313 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms