RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KDM8Q8N371 416 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 MAB21L3Q8N8X9 362 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 KBTBD3Q8NAB2 608 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 TMEM185AQ8NFB2 350 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 HAS2Q92819 552 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 CD101Q93033 1021 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 ULK4Q96C45 1275 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 MRPL38Q96DV4 380 aaKnown RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 LYZL4Q96KX0 146 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 C16orf45Q96MC5 204 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 GUCD1Q96NT3 240 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 KCNK16Q96T55 309 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 MEIS3Q99687 375 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 FAM49AQ9H0Q0 323 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 C19orf25Q9UFG5 118 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 NSG2Q9Y328 171 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 TMED7Q9Y3B3 224 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 CLCA3PQ9Y6N3 262 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 MACROD2A1Z1Q3 448 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 LACTBL1A8MY62 500 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 SLC28A1O00337 649 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 RASGRF2O14827 1237 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 CLN5O75503 358 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 KRT33AO76009 404 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 TRIM16O95361 564 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 MT-ATP6P00846 226 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ATP1B1P05026 303 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 SKILP12757 684 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ZNF18P17022 549 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 RPA1P27694 616 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 RBMS1P29558 406 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 CEACAM8P31997 349 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 DCTP40126 519 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 HNRNPFP52597 415 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 NANOS2P60321 138 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 SRP54P61011 504 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ZXDBP98169 803 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 MYL7Q01449 175 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 PPP1R8Q12972 351 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 PTPN14Q15678 1187 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 EXT1Q16394 746 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 CCDC40Q4G0X9 1142 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 LCN1P1Q5VSP4 162 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ZCCHC12Q6PEW1 402 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 PSRC1Q6PGN9 363 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 DLEU7Q6UYE1 221 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 RBM43Q6ZSC3 357 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ADCK1Q86TW2 530 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 ISCA2Q86U28 154 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 PIGZQ86VD9 579 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 OR4C15Q8NGM1 316 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 NSMCE2Q96MF7 247 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 DDX47Q9H0S4 455 aaKnown RBP4.53□□□□□ -1.68
SCFD1-209ENST00000553280 PIGVQ9NUD9 493 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 EXOC1Q9NV70 894 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 OR6C2Q9NZP2 312 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 FBXL4Q9UKA2 621 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 SH3GLB1Q9Y371 365 aa4.53□□□□□ -1.68
SCFD1-209ENST00000553280 IGHV4-61A0A0C4DH41 118 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 MTMR11A4FU01 709 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 RGSL1A5PLK6 1076 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 ARHGAP42A6NI28 874 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 EPHB6O15197 1021 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 KCNAB3O43448 404 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 KIF5CO60282 957 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 OR6B1O95007 311 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 IGHV4-59P01825 116 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 CXCL10P02778 98 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PGK2P07205 417 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 GHRP10912 638 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PAX1P15863 534 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 ARF4P18085 180 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-209ENST00000553280 ASMTP46597 345 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 THBS3P49746 956 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 DNA2P51530 1060 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 POLR2FP61218 127 aaKnown RBP4.52□□□□□ -1.69
SCFD1-209ENST00000553280 IRX4P78413 519 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 GPR17Q13304 367 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 CDH18Q13634 790 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 P2RY6Q15077 328 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 ACCSLQ4AC99 568 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 C12orf60Q5U649 245 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 OR6B2Q6IFH4 312 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 SPSB3Q6PJ21 355 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 DHRS11Q6UWP2 260 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 C5orf24Q7Z6I8 188 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 TAF8Q7Z7C8 310 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 STHQ8IWL8 128 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 KIRREL3Q8IZU9 778 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 ZNF444Q8N0Y2 327 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-209ENST00000553280 GPC2Q8N158 579 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 FAM89BQ8N5H3 189 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 SMYD1Q8NB12 490 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 LMO3Q8TAP4 145 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 SEPT8Q92599 483 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 TMEM143Q96AN5 459 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms