RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TRIM55Q9BYV6 548 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 CD244Q9BZW8 370 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 TGIF2Q9GZN2 237 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 SOX17Q9H6I2 414 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 NT5DC2Q9H857 520 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 ANKHQ9HCJ1 492 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 P4HTMQ9NXG6 502 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 TRPC4Q9UBN4 977 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 PIEZO2Q9H5I5 2752 aa14.63□□□□□ -0.07
PRPF40B-211ENST00000551063 URADA6NGE7 173 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ESPNB1AK53 854 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 K7EPI3 171 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 MAP2K7O14733 419 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 PCDH17O14917 1159 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 CCNT2O60583 730 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 FLNBO75369 2602 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 DNAJB5O75953 348 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 CYC1P08574 325 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 RBP1P09455 135 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 IL1RNP18510 177 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 KLC1Q07866 573 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 CHAF1BQ13112 559 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 E2F2Q14209 437 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 NAA30Q147X3 362 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 SETDB1Q15047 1291 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 RBBP5Q15291 538 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 TBCCQ15814 346 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 VWA2Q5GFL6 755 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 TECRLQ5HYJ1 363 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 PAGE2BQ5JRK9 111 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 TCTN3Q6NUS6 607 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ZC3H7AQ8IWR0 971 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ANKRD53Q8N9V6 530 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 OR9A4Q8NGU2 314 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ABHD17AQ96GS6 310 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 SLC6A16Q9GZN6 736 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ANKZF1Q9H8Y5 726 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 PSMC3IPQ9P2W1 217 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 OPTCQ9UBM4 332 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 TMCO1Q9UM00 188 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 ASB1Q9Y576 335 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 PCDHGA9Q9Y5G4 932 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 HS3ST3B1Q9Y662 390 aa14.62□□□□□ -0.07
PRPF40B-211ENST00000551063 IQANK1A0A1B0GTG1 560 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 CEACAM4O75871 244 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 KLHL18O94889 574 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 SERPIND1P05546 499 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 SERPINA6P08185 405 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 GFAPP14136 432 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 ALOX12P18054 663 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 EPORP19235 508 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 ALDH18A1P54886 795 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 SNRPNP63162 240 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 MAT1AQ00266 395 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 PCDH1Q08174 1060 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 LAPTM5Q13571 262 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 RBBP7Q16576 425 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 LACTB2Q53H82 288 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 XKR6Q5GH73 641 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 DCAF10Q5QP82 559 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 METTL2BQ6P1Q9 378 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 TMIGD1Q6UXZ0 262 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 ATG14Q6ZNE5 492 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 SHISA6Q6ZSJ9 500 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 ABHD13Q7L211 337 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 TMEM151BQ8IW70 566 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 PLD6Q8N2A8 252 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 CREB3L4Q8TEY5 395 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 MOCOSQ96EN8 888 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 PTCD3Q96EY7 689 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 CCDC77Q9BR77 488 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 PPCSQ9HAB8 311 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 C3orf18Q9UK00 162 aa14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 G3BP2Q9UN86 482 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 TNPO3Q9Y5L0 923 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 MDC1Q14676 2089 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-211ENST00000551063 AGPSO00116 658 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 SOCS6O14544 535 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 GALR3O60755 368 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 PRAMEF4O60810 478 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 CLEC3AO75596 197 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 SLU7O95391 586 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 HPDP32754 393 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 CASP2P42575 452 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 AGTR2P50052 363 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 IRF8Q02556 426 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 DOC2AQ14183 400 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 PCBP2Q15366 365 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■■■□ 24.1
PRPF40B-211ENST00000551063 PRAMEF9Q5VWM5 478 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 PRSS41Q7RTY9 318 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 LCA5Q86VQ0 697 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 PDSS2Q86YH6 399 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 CLEC1AQ8NC01 280 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 UBE2E3Q969T4 207 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 SLC25A23Q9BV35 468 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 CLK4Q9HAZ1 481 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 MLXIPLQ9NP71 852 aa14.6□□□□□ -0.07
PRPF40B-211ENST00000551063 XPR1Q9UBH6 696 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms