RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IYDQ6PHW0 289 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 BTNL8Q6UX41 500 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 NHLRC1Q6VVB1 395 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 PIGZQ86VD9 579 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 UXS1Q8NBZ7 420 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 GRK7Q8WTQ7 553 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 GDAP1L1Q96MZ0 367 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 CDK19Q9BWU1 502 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 SHARPINQ9H0F6 387 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 CHST11Q9NPF2 352 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 P4HTMQ9NXG6 502 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 RNF186Q9NXI6 227 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 SEPT10Q9P0V9 454 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 CHKBQ9Y259 395 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 UBR3Q6ZT12 1888 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 C4BP0C0L5 1744 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 TIAM2Q8IVF5 1701 aa4.41□□□□□ -1.7
LIMA1-205ENST00000550592 PIK3C2GO75747 1445 aa4.4□□□□□ -1.7
LIMA1-205ENST00000550592 TAF1LQ8IZX4 1826 aa4.4□□□□□ -1.7
LIMA1-205ENST00000550592 SDR42E2A6NKP2 422 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 C2CD4DB7Z1M9 353 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 ST8SIA3O43173 380 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 FMO6PO60774 539 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SLC22A3O75751 556 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 DDHD2O94830 711 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 PLGP00747 810 aaPredicted RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 EDN1P05305 212 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 ERVK-10P10266 1014 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 EEF2P13639 858 aaKnown RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 PHEXP78562 749 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 GCNT1Q02742 428 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SULT2A1Q06520 285 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 RBBP7Q16576 425 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 KIAA1644Q3SXP7 199 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 XKR6Q5GH73 641 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 STPG1Q5TH74 334 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 MARK2Q7KZI7 788 aaKnown RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 TRMT1LQ7Z2T5 733 aaKnown RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 TUSC5Q8IXB3 177 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 NUP93Q8N1F7 819 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF843Q8N446 348 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 DBF4BQ8NFT6 615 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 TRIM58Q8NG06 486 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 NCOA7Q8NI08 942 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 AFAP1L1Q8TED9 768 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 HPSE2Q8WWQ2 592 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 PTP4A1Q93096 173 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF524Q96C55 264 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SGF29Q96ES7 293 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 LMLNQ96KR4 655 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 INPP4AQ96PE3 977 aaPredicted RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 UHRF2Q96PU4 802 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 EPYCQ99645 322 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 UTP14AQ9BVJ6 771 aaKnown RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SDCBP2Q9H190 292 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SIX2Q9NPC8 291 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 INTS9Q9NV88 658 aaKnown RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 PKD2L2Q9NZM6 624 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF624Q9P2J8 865 aaPredicted RBP4.4□□□□□ -1.71
LIMA1-205ENST00000550592 SZT2Q5T011 3432 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 RGPD5Q99666 1765 aa4.4□□□□□ -1.71
LIMA1-205ENST00000550592 DICER1Q9UPY3 1922 aaKnown RBP4.39□□□□□ -1.71
LIMA1-205ENST00000550592 C4AP0C0L4 1744 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 PRSS44E7EML9 344 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 ANKRD34CP0C6C1 535 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 VDRP11473 427 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 ANOS1P23352 680 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 OAS2P29728 719 aaKnown RBP4.39□□□□□ -1.71
LIMA1-205ENST00000550592 GLIPR1P48060 266 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 TRAP1Q12931 704 aaKnown RBP4.39□□□□□ -1.71
LIMA1-205ENST00000550592 UGT3A1Q6NUS8 523 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 CASC4Q6P4E1 433 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 SLC16A9Q7RTY1 509 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 DCUN1D3Q8IWE4 304 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC170Q8IYT3 715 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 MARVELD2Q8N4S9 558 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 DEFB123Q8N688 67 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 AMER3Q8N944 861 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 OR10V1Q8NGI7 309 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 LRRC8CQ8TDW0 803 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 SLC26A7Q8TE54 656 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 PYCR2Q96C36 320 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 AK8Q96MA6 479 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 NDNQ99608 321 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF350Q9GZX5 532 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 MMADHCQ9H3L0 296 aaPredicted RBP4.39□□□□□ -1.71
LIMA1-205ENST00000550592 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 SLCO1C1Q9NYB5 712 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 GRID1Q9ULK0 1009 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 PA2G4Q9UQ80 394 aaKnown RBP4.39□□□□□ -1.71
LIMA1-205ENST00000550592 IL16Q14005 1332 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 TRPM7Q96QT4 1865 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 COL6A3P12111 3177 aa4.39□□□□□ -1.71
LIMA1-205ENST00000550592 PIEZO1Q92508 2521 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SLIT3O75094 1523 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms