RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CSF1RP07333 972 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 AHCYP23526 432 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 PTPN9P43378 593 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 WNT3AP56704 352 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 KCNAB2Q13303 367 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 MAPK14Q16539 360 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 CHRFAM7AQ494W8 412 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 AGAP6Q5VW22 663 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 CAPN13Q6MZZ7 669 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-216ENST00000545170 KCT2Q8NC54 265 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 NANPQ8TBE9 248 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 THEM6Q8WUY1 208 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 THRSPQ92748 146 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 AGAP4Q96P64 663 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 DUSP26Q9BV47 211 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 IMP3Q9NV31 184 aaKnown RBP8.38□□□□□ -1.07
ATXN3-216ENST00000545170 SOHLH2Q9NX45 425 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 MIOSQ9NXC5 875 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 SLC17A6Q9P2U8 582 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 MRTO4Q9UKD2 239 aaKnown RBP8.38□□□□□ -1.07
ATXN3-216ENST00000545170 SCML2Q9UQR0 700 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 PCDHGB2Q9Y5G2 931 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 CACNG2Q9Y698 323 aa8.38□□□□□ -1.07
ATXN3-216ENST00000545170 BCAS1O75363 584 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 MATN4O95460 622 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 HPRP00739 348 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FGF1P05230 155 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 HSD11B1P28845 292 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ETV3P41162 512 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PLA2G16P53816 162 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 RAB33AQ14088 237 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 TRAM1Q15629 374 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 GPR19Q15760 415 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SLC22A10Q63ZE4 541 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 RAET1GQ6H3X3 334 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PXKQ7Z7A4 578 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PARGQ86W56 976 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SIDT2Q8NBJ9 832 aaKnown RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 NFKBIDQ8NI38 313 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 GRHL3Q8TE85 626 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PAPOLGQ9BWT3 736 aaKnown RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 HEBP1Q9NRV9 189 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SMOXQ9NWM0 555 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 RNASEH2AO75792 299 aaKnown RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 APOA2P02652 100 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ITGA5P08648 1049 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CES1P23141 567 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 BDNFP23560 247 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CDKN2BP42772 138 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 GLP1RP43220 463 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 TGFB2P61812 414 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CDK3Q00526 305 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF484Q5JVG2 852 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ALKBH2Q6NS38 261 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 MED27Q6P2C8 311 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 KCTD20Q7Z5Y7 419 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CEACAM19Q7Z692 300 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FIBCD1Q8N539 461 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 OR52H1Q8NGJ2 320 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF597Q96LX8 424 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SLC35A5Q9BS91 424 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CEP170Q5SW79 1584 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 TMEM150BA6NC51 233 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CLIC1O00299 241 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SLC1A7O00341 560 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 YY2O15391 372 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 STK16O75716 305 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 HCKP08631 526 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 CREMQ03060 361 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PDSS1Q5T2R2 415 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SLC22A15Q8IZD6 547 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 OTUB2Q96DC9 234 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 MFFQ9GZY8 342 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PLCXD1Q9NUJ7 323 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 B3GNT3Q9Y2A9 372 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 COL15A1P39059 1388 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FAM230AA0A1W2PPH8 454 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PIP5K1CO60331 668 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 KCNJ13O60928 360 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 MITFO75030 526 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 HOXD13P35453 343 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 GTF2A2P52657 109 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 AARDQ4LEZ3 155 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 JOSD2Q8TAC2 188 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 SGTBQ96EQ0 304 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 LRRC46Q96FV0 321 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-216ENST00000545170 OR51E2Q9H255 320 aa8.37□□□□□ -1.07
ATXN3-216ENST00000545170 PCDHGB5Q9Y5G0 923 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms