RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PANX1Q96RD7 426 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 RAD9AQ99638 391 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 HHATLQ9HCP6 504 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 PCDHGB3Q9Y5G1 929 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 SOCS7O14512 581 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 TOR1AO14656 332 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 PEX11BO96011 259 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 NUDT7P0C024 238 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 OGNP20774 298 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 TALDO1P37837 337 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZNF33BQ06732 778 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 GALEQ14376 348 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 PAN2Q504Q3 1202 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 XKRXQ6PP77 449 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 CCDC149Q6ZUS6 474 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 CIR1Q86X95 450 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 OR9Q2Q8NGE9 314 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZNF431Q8TF32 576 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 DNAJA4Q8WW22 397 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 RIT1Q92963 219 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 MAL2Q969L2 176 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 DPCDQ9BVM2 203 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 MIXL1Q9H2W2 232 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 HS3ST4Q9Y661 456 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 IRAK2O43187 625 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 SLC2A2P11168 524 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 LIMK1P53667 647 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 MAD2L1Q13257 205 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 PTPRRQ15256 657 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 PSAPL1Q6NUJ1 521 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 MSANTD2Q6P1R3 559 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ARRDC2Q8TBH0 407 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 OPALINQ96PE5 141 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 DCLRE1CQ96SD1 692 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 GTPBP2Q9BX10 602 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 ELOVL6Q9H5J4 265 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZNF222Q9UK12 451 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ACTL7AQ9Y615 435 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 LOC730098B7Z3J9 87 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 KLK8O60259 260 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 IL1RNP18510 177 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 ITGA1P56199 1179 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 SPIBQ01892 262 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 BTN1A1Q13410 526 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 PPIGQ13427 754 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMG8-202ENST00000543872 FGFBP1Q14512 234 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 ALFQ53S48 1182 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 C22orf42Q6IC83 251 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 GPR150Q8NGU9 434 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 FAM129BQ96TA1 746 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 POLR2J2Q9GZM3 115 aaKnown RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 MGAT4AQ9UM21 535 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 CCL27Q9Y4X3 112 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 NDUFA2O43678 99 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 PI15O43692 258 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 RRAS2P62070 204 aaPredicted RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 ZNF235Q14590 738 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 TOR1AIP1Q5JTV8 583 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 FAM124AQ86V42 546 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 LGI4Q8N135 537 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 TOP6BLQ8N6T0 577 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 CD200R1Q8TD46 325 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 IFT22Q9H7X7 185 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 MRPL39Q9NYK5 338 aaKnown RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 WWOXQ9NZC7 414 aa12.22□□□□□ -0.45
SMG8-202ENST00000543872 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
SMG8-202ENST00000543872 SUV39H1O43463 412 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 ATG13O75143 517 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 KCNK5O95279 499 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 GLYR1Q49A26 553 aaPredicted RBP12.21□□□□□ -0.45
SMG8-202ENST00000543872 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 KIAA1324Q6UXG2 1013 aaKnown RBP12.21□□□□□ -0.45
SMG8-202ENST00000543872 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 Q8N402 240 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 ZBTB44Q8NCP5 570 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 TESCQ96BS2 214 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 FANCFQ9NPI8 374 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 HACL1Q9UJ83 578 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 GMEB2Q9UKD1 530 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 MAPRE3Q9UPY8 281 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 SLC28A1O00337 649 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 FPGTO14772 594 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 ARSBP15848 533 aa12.21□□□□□ -0.45
SMG8-202ENST00000543872 GPR85P60893 370 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms