RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CUL3Q13618 768 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 KRT33BQ14525 404 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 NR6A1Q15406 480 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 BROXQ5VW32 411 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 ATG9BQ674R7 924 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 CAPRIN2Q6IMN6 1127 aaKnown RBP11.04□□□□□ -0.64
COPS7A-217ENST00000543537 LETMD1Q6P1Q0 360 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 SLC30A9Q6PML9 568 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 GPR155Q7Z3F1 870 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 TMPRSS9Q7Z410 1059 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 ZFAND4Q86XD8 727 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 SNX32Q86XE0 403 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 VRK3Q8IV63 474 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 ZNF547Q8IVP9 402 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 FBXW8Q8N3Y1 598 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 GOLM1Q8NBJ4 401 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 OR52B6Q8NGF0 335 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 WBP1Q96G27 269 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 PKP4Q99569 1192 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 PRPF18Q99633 342 aaKnown RBP11.04□□□□□ -0.64
COPS7A-217ENST00000543537 CMKLR1Q99788 373 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 CENPKQ9BS16 269 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 THTPAQ9BU02 230 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 LRTM1Q9HBL6 345 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 SIRT5Q9NXA8 310 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 PDP2Q9P2J9 529 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 RUVBL1Q9Y265 456 aaKnown RBP11.04□□□□□ -0.64
COPS7A-217ENST00000543537 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 GPR45Q9Y5Y3 372 aa11.04□□□□□ -0.64
COPS7A-217ENST00000543537 ZFC3H1O60293 1989 aaKnown RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PRR19A6NJB7 356 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 RHPN2P1A8MT19 583 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 LSM1O15116 133 aaKnown RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PPM1DO15297 605 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PEX11AO75192 247 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 SLC16A8O95907 504 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 C1GALT1C1LP0DN25 315 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 ERGP11308 486 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TSPAN8P19075 237 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 CD1CP29017 333 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 NUDT2P50583 147 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TRAP1Q12931 704 aaKnown RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 SPIN4Q56A73 249 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 XKR6Q5GH73 641 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 SAMD4BQ5PRF9 694 aaKnown RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 MED27Q6P2C8 311 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PGM2L1Q6PCE3 622 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 ABRAXAS1Q6UWZ7 409 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 RINLQ6ZS11 566 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 Q6ZSR9 355 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TRIM74Q86UV6 250 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 RBM12BQ8IXT5 1001 aaKnown RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 DSELQ8IZU8 1212 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 KIF2BQ8N4N8 673 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 Q8N9G6 341 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TNIP2Q8NFZ5 429 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 CXorf40BQ96DE9 158 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 QRFPRQ96P65 431 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TRIM15Q9C019 465 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TUBB1Q9H4B7 451 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 RMND5AQ9H871 391 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 VPS29Q9UBQ0 182 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 ZNF225Q9UK10 706 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 CROTQ9UKG9 612 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PRDM4Q9UKN5 801 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 TIMM22Q9Y584 194 aa11.03□□□□□ -0.64
COPS7A-217ENST00000543537 PCYT1BQ9Y5K3 369 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-217ENST00000543537 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 LRRC14BA6NHZ5 514 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 E7ENX8 843 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 K7ENP7 123 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PPP6CO00743 305 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 AIM2O14862 343 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 KLK10O43240 276 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SEC22BO75396 215 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PRPS1L1P21108 318 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ME2P23368 584 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PTX3P26022 381 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CD82P27701 267 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 IMPA1P29218 277 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PBLDP30039 288 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SLC5A2P31639 672 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 GRK3P35626 688 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PREPP48147 710 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 RAB28P51157 221 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms