RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CSTF1Q05048 431 aaKnown RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 KLRC3Q07444 240 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 GPS2Q13227 327 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 DYRK1AQ13627 763 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 NR1D2Q14995 579 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 SSX2Q16385 188 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 RABL3Q5HYI8 236 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 LDLRAP1Q5SW96 308 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 TREML2Q5T2D2 321 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 CARD17Q5XLA6 110 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 IRF2BP2Q7Z5L9 587 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 CLNKQ7Z7G1 428 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 DTX2Q86UW9 622 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 CCDC60Q8IWA6 550 aaPredicted RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 NECAB1Q8N987 351 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 ZNF397Q8NF99 534 aaPredicted RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 TSEN15Q8WW01 171 aaKnown RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 DAZAP1Q96EP5 407 aaKnown RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 C12orf66Q96MD2 445 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 TAAR6Q96RI8 345 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 RASL10BQ96S79 203 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 DCLRE1CQ96SD1 692 aaKnown RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 MVB12BQ9H7P6 319 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 PSTPIP2Q9H939 334 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 LY9Q9HBG7 655 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 LRRC4CQ9HCJ2 640 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 HHATLQ9HCP6 504 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 TXNRD2Q9NNW7 524 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 LZTFL1Q9NQ48 299 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 IL20RAQ9UHF4 553 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 KCNJ14Q9UNX9 436 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 ATP6V1DQ9Y5K8 247 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 RBBP6Q7Z6E9 1792 aaKnown RBP5.28□□□□□ -1.56
DDB1-219ENST00000541513 PLXNA1Q9UIW2 1896 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 NID2Q14112 1375 aa5.28□□□□□ -1.56
DDB1-219ENST00000541513 PLXNB2O15031 1838 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PFASO15067 1338 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TRAV6A0A075B6T7 132 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PRAMEF33A0A0G2JMD5 474 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 KANSL1LA0AUZ9 987 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TTC26A0AVF1 554 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 OR6C65A6NJZ3 312 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PRR23D1E9PI22 279 aaPredicted RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 F5H697 171 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 DYNC1I1O14576 645 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ARHGEF9O43307 516 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 EXTL3O43909 919 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PRAMEF10O60809 474 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 STC2O76061 302 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 LUC7L3O95232 432 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 SPATA31C1P0DKV0 1188 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PRR23D2P0DMB1 279 aaPredicted RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 OR8G3PP0DMU2 310 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CALM1P0DP23 149 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CALM2P0DP24 149 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CALM3P0DP25 149 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SLC2A3P11169 496 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 CREB1P16220 341 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 DDX5P17844 614 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 CD22P20273 847 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 FBLP22087 321 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 AZGP1P25311 298 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 CD1BP29016 333 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 STAT6P42226 847 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SLC1A4P43007 532 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CDX1P47902 265 aaPredicted RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 VAV2P52735 878 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CHN2P52757 468 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 IRX4P78413 519 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ROR2Q01974 943 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 SLC18A2Q05940 514 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TROAPQ12815 778 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 DRP2Q13474 957 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NFYCQ13952 458 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 CHRNA6Q15825 494 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 AANATQ16613 207 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 FAM214AQ32MH5 1076 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ASPRV1Q53RT3 343 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 FSCBQ5H9T9 825 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SPANXN2Q5MJ10 180 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 C6orf10Q5SRN2 563 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PIP5KL1Q5T9C9 394 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ERICH5Q6P6B1 374 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 Q6ZUG5 572 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 DPPA4Q7L190 304 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 BZW1Q7L1Q6 419 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 SLC16A9Q7RTY1 509 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NRARPQ7Z6K4 114 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ASPGQ86U10 573 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TMPRSS6Q8IU80 811 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TMEM126BQ8IUX1 230 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 PALM2Q8IXS6 379 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ADGRG5Q8IZF4 528 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 FUKQ8N0W3 1084 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms