RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 NAF1Q96HR8 494 aaKnown RBP17.87■□□□□ 0.45
VPS33A-205ENST00000541169 SLC45A3Q96JT2 553 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 CENPKQ9BS16 269 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 TRMOQ9BU70 441 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 SLC6A16Q9GZN6 736 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 SLC26A1Q9H2B4 701 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ANKHQ9HCJ1 492 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 STARD5Q9NSY2 213 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 IFT80Q9P2H3 777 aaPredicted RBP17.87■□□□□ 0.45
VPS33A-205ENST00000541169 CROTQ9UKG9 612 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 PPT2Q9UMR5 302 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 URB1O60287 2271 aaKnown RBP17.87■□□□□ 0.45
VPS33A-205ENST00000541169 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ZWINTO95229 277 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 NSA2O95478 260 aaKnown RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ITGAXP20702 1163 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 PTPN4P29074 926 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ARL1P40616 181 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 SLC18A1P54219 525 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 LCP2Q13094 533 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 DNASE1L3Q13609 305 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 DSG2Q14126 1118 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 NCF4Q15080 339 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 TGIF1Q15583 401 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ST3GAL2Q16842 350 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 TMEM35AQ53FP2 167 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 CFAP157Q5JU67 520 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 CHSY3Q70JA7 882 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 MILR1Q7Z6M3 343 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 MYLK4Q86YV6 388 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 GOLGA6L1Q8N7Z2 621 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 CREB3L4Q8TEY5 395 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 CT55Q8WUE5 264 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 C10orf90Q96M02 699 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF382Q96SR6 550 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ROGDIQ9GZN7 287 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 CHST8Q9H2A9 424 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ACBD3Q9H3P7 528 aa17.86■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF490Q9ULM2 529 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 FARSAQ9Y285 508 aaKnown RBP17.86■□□□□ 0.45
VPS33A-205ENST00000541169 TEX51A0A1B0GUA7 166 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF891A8MT65 544 aaPredicted RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 OR7A17O14581 309 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 TERTO14746 1132 aaKnown RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 P2RX6O15547 441 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 TRIM13O60858 407 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SERPIND1P05546 499 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 ENO1P06733 434 aaKnown RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 CTSBP07858 339 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 CYC1P08574 325 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SPTBP11277 2137 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SERPINB5P36952 375 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 RBBP7Q16576 425 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 OVCH1Q7RTY7 1134 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SYVN1Q86TM6 617 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 ARMC2Q8NEN0 867 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 OR7G3Q8NG95 312 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SNRNP27Q8WVK2 155 aaKnown RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 GAL3ST3Q96A11 431 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 COL26A1Q96A83 441 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 CMTM7Q96FZ5 175 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 CNDP1Q96KN2 507 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 FAM111AQ96PZ2 611 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 TMEM237Q96Q45 408 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SPNS1Q9H2V7 528 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 TMBIM4Q9HC24 238 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 ZBTB26Q9HCK0 441 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SEMA4BQ9NPR2 832 aaPredicted RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF282Q9UDV7 671 aaPredicted RBP17.85■□□□□ 0.45
VPS33A-205ENST00000541169 SNX6Q9UNH7 406 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 MAP4K5Q9Y4K4 846 aa17.85■□□□□ 0.45
VPS33A-205ENST00000541169 LOC101059948A0A1B0GTJ6 334 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 LRIT2A6NDA9 550 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 LRRC14BA6NHZ5 514 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 FOXE1O00358 373 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 PCDH17O14917 1159 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 PRAMEF4O60810 478 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 SNUPNO95149 360 aaKnown RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 LIFP15018 202 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 ALOX12P18054 663 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 CD22P20273 847 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 FBLP22087 321 aaKnown RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 PTX3P26022 381 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 TSFMP43897 325 aaKnown RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 OCA2Q04671 838 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 VAC14Q08AM6 782 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 ADPRMQ3LIE5 342 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 UNC50Q53HI1 259 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 AGBL2Q5U5Z8 902 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 C1orf189Q5VU69 101 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 PRAMEF9Q5VWM5 478 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 AFAP1L2Q8N4X5 818 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 KCT2Q8NC54 265 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 MMABQ96EY8 250 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 VPS50Q96JG6 964 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 FAR2Q96K12 515 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 IP6K3Q96PC2 410 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 SLC29A3Q9BZD2 475 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms