RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CBSLP0DN79 551 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ITIH1P19827 911 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CBSP35520 551 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 PRIM2P49643 509 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ST13P50502 369 aaKnown RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RPS3AP61247 264 aaKnown RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TMEM115Q12893 351 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SLBPQ14493 270 aaKnown RBP eCLIP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RGNQ15493 299 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 KIAA1614Q5VZ46 1190 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RNF130Q86XS8 419 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 KREMEN2Q8NCW0 462 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 WDR20Q8TBZ3 569 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TRUB1Q8WWH5 349 aaKnown RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ZSWIM3Q96MP5 696 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RDH12Q96NR8 316 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 COPS4Q9BT78 406 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 MAGIXQ9H6Y5 334 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 OGDHLQ9ULD0 1010 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CAB39Q9Y376 341 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 WASH3PC4AMC7 463 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TNFRSF11BO00300 401 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TPST2O60704 377 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 STSP08842 583 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 HNMTP50135 292 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TBPL1P62380 186 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF284Q2VY69 593 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TCEAL5Q5H9L2 206 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 COLEC12Q5KU26 742 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SETD9Q8NE22 299 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 APH1BQ8WW43 257 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 LGALS12Q96DT0 336 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ZHX1-C8orf76Q96EF9 292 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ABCG4Q9H172 646 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RETREG1Q9H6L5 497 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RPS6KA6Q9UK32 745 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 PCDHB11Q9Y5F2 797 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 MYO10Q9HD67 2058 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 KRBA1A5PL33 1030 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SH3BP5O60239 455 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 GPX2P18283 190 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 MAGEA2P43356 314 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TAS2R50P59544 299 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 KCNJ10P78508 379 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 TNFAIP8L2Q6P589 184 aaPredicted RBP13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 C11orf96Q7Z7L8 435 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SLC35A5Q9BS91 424 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 CTPS2Q9NRF8 586 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF229Q9UJW7 825 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 H3BM21 787 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 SULT1C4O75897 302 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 SOX14O95416 240 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 RYKP34925 604 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 MAGEA10P43363 369 aaPredicted RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 SRSF11Q05519 484 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 C2orf80Q0P641 193 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 PRSS53Q2L4Q9 553 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 FAM124AQ86V42 546 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF480Q8WV37 535 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 CEP295NLQ96MC4 621 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 EXO1Q9UQ84 846 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 RUVBL1Q9Y265 456 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 PRAMEF25A6NGN4 478 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 WASHC1A8K0Z3 465 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 PCDH17O14917 1159 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 CBFA2T3O75081 653 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms