RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 INHBBP09529 407 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 HOXD12P35452 270 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 SOX11P35716 441 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 YAP1P46937 504 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 HLCSP50747 726 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 DDX39BQ13838 428 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 GCNT7Q6ZNI0 430 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 USP34Q70CQ2 3546 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 WDR20Q8TBZ3 569 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 TSPEARQ8WU66 669 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 TSACCQ96A04 125 aaPredicted RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 PLEKHA8Q96JA3 519 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 CCDC177Q9NQR7 707 aaPredicted RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRDM8Q9NQV8 689 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRR19A6NJB7 356 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 CHURC1-FNTBB4DL54 471 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 MT-ND1P03886 318 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 IGHV4-34P06331 123 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 HOXC4P09017 264 aaPredicted RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 UMPSP11172 480 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZNF12P17014 697 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 POLR2JP52435 117 aaKnown RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 KCNK10P57789 538 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 KIAA1024LP59773 190 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ADARB1P78563 741 aaKnown RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 PCDH1Q08174 1060 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 RCAN2Q14206 197 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 NFATC4Q14934 902 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 PLCL1Q15111 1095 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 CCNYL2Q5T2Q4 361 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 GRHL2Q6ISB3 625 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZFAND4Q86XD8 727 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 CENPSQ8N2Z9 138 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 MAGEB10Q96LZ2 347 aaPredicted RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 FERD3LQ96RJ6 166 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 MENTQ9BUN1 341 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ACAT2Q9BWD1 397 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 TRIT1Q9H3H1 467 aaKnown RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ARMC7Q9H6L4 198 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 IMP3Q9NV31 184 aaKnown RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 GPRC5BQ9NZH0 403 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMEM9Q9P0T7 183 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 EIF3LQ9Y262 564 aaKnown RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 OR52A4PA6NMU1 304 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 E2F6O75461 281 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 HNF4AP41235 474 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 RXRGP48443 463 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 BNIP3Q12983 259 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 PAGE3Q5JUK9 113 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 LIX1Q8N485 282 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 RLN3Q8WXF3 142 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 APIPQ96GX9 242 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 TUBA1CQ9BQE3 449 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 DYRK1BQ9Y463 629 aa16.42■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 PDZK1P1A8MUH7 402 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 C10orf142B7Z368 130 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 H0YIV9 168 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 NOL3O60936 208 aaKnown RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 IGLV3-19P01714 112 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 RPN2P04844 631 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 IDSP22304 550 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 CASP2P42575 452 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 ATP1A4Q13733 1029 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 AASDHQ4L235 1098 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMEM53Q6P2H8 277 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 C16orf87Q6PH81 154 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 HOMEZQ8IX15 550 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 SYNPOQ8N3V7 929 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 FAM160A2Q8N612 972 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TSTD1Q8NFU3 115 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 PNPT1Q8TCS8 783 aaKnown RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TANKQ92844 425 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 CNDP2Q96KP4 475 aaKnown RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 WDR92Q96MX6 357 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 GPR174Q9BXC1 333 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TPSD1Q9BZJ3 242 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 LTB4R2Q9NPC1 389 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 DLGAP4Q9Y2H0 992 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 HTR3EA5X5Y0 456 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 PI15O43692 258 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 SH3BGRLO75368 114 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 EEDO75530 441 aaKnown RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 CPNE6O95741 557 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 AK4P27144 223 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 AKT2P31751 481 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 EEFSECP57772 596 aaKnown RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 MEF2AQ02078 507 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 MAD2L1Q13257 205 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 E2F2Q14209 437 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 SMU1Q2TAY7 513 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TIGD2Q4W5G0 525 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TBPL2Q6SJ96 375 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 KIAA2013Q8IYS2 634 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMEM145Q8NBT3 493 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms