RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 PTRHD1Q6GMV3 140 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 TSEN54Q7Z6J9 526 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 RASAL3Q86YV0 1011 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 GDPD1Q8N9F7 314 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 NIPSNAP1Q9BPW8 284 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 PRRG3Q9BZD7 231 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 NDUFAF4Q9P032 175 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 MAPRE3Q9UPY8 281 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 DOCK3Q8IZD9 2030 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF670-ZNF695F2Z2N8 137 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 PRPH2P23942 346 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 HOXD9P28356 352 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM189BP81408 668 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 RHAGQ02094 409 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 CST9Q5W186 159 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 GPR152Q8TDT2 470 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 BTN2A2Q8WVV5 523 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 CMTM7Q96FZ5 175 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 EXOC2Q96KP1 924 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 SPATA9Q9BWV2 254 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 SEC14L4Q9UDX3 406 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 VPS4AQ9UN37 437 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 A8MVJ9 347 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 PSMA1P25786 263 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 KIR2DL3P43628 341 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 CACNG1Q06432 222 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 LARS2Q15031 903 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 PDZK1Q5T2W1 519 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF467Q7Z7K2 595 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 TRIM69Q86WT6 500 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 OR4C15Q8NGM1 316 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 ENKURQ8TC29 256 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 UCK2Q9BZX2 261 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF556Q9HAH1 456 aa17.92■□□□□ 0.46
SFSWAP-207ENST00000538548 A0A0D9SEW6 157 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 ANKRD66B4E2M5 251 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 M0QZQ0 153 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 TEX28O15482 410 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 STK16O75716 305 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 CSF2P04141 144 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 CR2P20023 1033 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 PRPS1L1P21108 318 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 DGKAP23743 735 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 SRSF11Q05519 484 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 MICAQ29983 383 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 CCNJQ5T5M9 372 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 LGI4Q8N135 537 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 LSMEM1Q8N8F7 131 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 SPPL2AQ8TCT8 520 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 HASPINQ8TF76 798 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 VPS35Q96QK1 796 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 ELOVL6Q9H5J4 265 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 TMEM229AB2RXF0 380 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 MPZL2O60487 215 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 SCN2BO60939 215 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 CCNB2O95067 398 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 PIPP12273 146 aaPredicted RBP17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 ALAS2P22557 587 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 CHMP24386 653 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 ITGB7P26010 798 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 VEPH1Q14D04 833 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 HKDC1Q2TB90 917 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 SAXO2Q658L1 398 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 RGMBQ6NW40 437 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 OR4M1Q8NGD0 313 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 MARVELD3Q96A59 401 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 MYEOVQ96EZ4 313 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 SPATA17Q96L03 361 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 TMPRSS11EQ9UL52 423 aa17.91■□□□□ 0.46
SFSWAP-207ENST00000538548 OR2B3O76000 313 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 PDE9AO76083 593 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 ACPPP15309 386 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 CRYBB2P43320 205 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 DSC3Q14574 896 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 GPR19Q15760 415 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 BTBD16Q32M84 506 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 PAMR1Q6UXH9 720 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 MIB1Q86YT6 1006 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 SLC44A2Q8IWA5 706 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 GPRC5AQ8NFJ5 357 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 OR52J3Q8NH60 311 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 APOLD1Q96LR9 279 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 ADGRE3Q9BY15 652 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 RACGAP1Q9H0H5 632 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 TPT1P8Q9HAU6 139 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 ABCB9Q9NP78 766 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 CLN6Q9NWW5 311 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 SLC6A14Q9UN76 642 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 STUB1Q9UNE7 303 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 RAI2Q9Y5P3 530 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 FABP12A6NFH5 140 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 TMCC2O75069 709 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 TBX18O95935 607 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 CYP17A1P05093 508 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 SOX3P41225 446 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 WNT3P56703 355 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 HOXC5Q00444 222 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 TATDN3Q17R31 274 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms