RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C4orf51C9J302 202 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 NPIPB8E9PQR5 432 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 CXCR6O00574 342 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 MAP3K13O43283 966 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 PRKD3O94806 890 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 IL9P15248 144 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 IL10P22301 178 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ALDH9A1P49189 494 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 MTAPQ13126 283 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 MED21Q13503 144 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SPIN4Q56A73 249 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 Q6ZSR6 202 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 TRIM73Q86UV7 250 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ADGRF3Q8IZF5 1079 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SLC22A18ASQ8N1D0 253 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 C16orf78Q8WTQ4 265 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 NELL1Q92832 810 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-205ENST00000538545 C1QTNF7Q9BXJ2 289 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 FOXQ1Q9C009 403 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 KLHL31Q9H511 634 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 AGPAT4Q9NRZ5 378 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ARMC1Q9NVT9 282 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SEMA4FO95754 770 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 C6orf47O95873 294 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 HNRNPA2B1P22626 353 aaKnown RBP13.52□□□□□ -0.24
ACTN1-205ENST00000538545 TPP2P29144 1249 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-205ENST00000538545 GZMMP51124 257 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 RAB28P51157 221 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 HBA1P69905 142 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 CSNK1G2P78368 415 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 PCDH1Q08174 1060 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF763Q0D2J5 394 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 C1orf61Q13536 156 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 DUOXA1Q1HG43 343 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-205ENST00000538545 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-205ENST00000538545 ADCY4Q8NFM4 1077 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 TRAPPC9Q96Q05 1148 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 TIMM29Q9BSF4 260 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF717Q9BY31 904 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-205ENST00000538545 RAPGEFL1Q9UHV5 662 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 MAN2B2Q9Y2E5 1009 aa13.52□□□□□ -0.24
ACTN1-205ENST00000538545 DPPA5A6NC42 116 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
ACTN1-205ENST00000538545 IGHV4-34P06331 123 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 LYNP07948 512 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 ANXA6P08133 673 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 MAOBP27338 520 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 DMPKQ09013 629 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 BLMHQ13867 455 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 NFATC4Q14934 902 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 EOGTQ5NDL2 527 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 USP30Q70CQ3 517 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
ACTN1-205ENST00000538545 EFHD1Q9BUP0 239 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 PHF7Q9BWX1 381 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-205ENST00000538545 TRIM15Q9C019 465 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 SLC6A20Q9NP91 592 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 LHX9Q9NQ69 397 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 TMEM45AQ9NWC5 275 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 DNMT3AQ9Y6K1 912 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-205ENST00000538545 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.25
ACTN1-205ENST00000538545 PRR19A6NJB7 356 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 HAT1O14929 419 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 DIRAS1O95057 198 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 SERPINA1P01009 418 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 HSD3B1P14060 373 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 ACPPP15309 386 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 FASP25445 335 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 HSD3B2P26439 372 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 PDK3Q15120 406 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 COX20Q5RI15 118 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 SLC9B2Q86UD5 537 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 REPS1Q96D71 796 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 DUS3LQ96G46 650 aaKnown RBP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 C17orf62Q9BQA9 187 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 HAUS8Q9BT25 410 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 MAGEL2Q9UJ55 1249 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 U3KQV3 271 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 WDFY3Q8IZQ1 3526 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 CACNA1IQ9P0X4 2223 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 ISM1B1AKI9 464 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 FOXE1O00358 373 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 BTN3A3O00478 584 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 CREG1O75629 220 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 RPN2P04844 631 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 GNAO1P09471 354 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms