RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SEMA4FO95754 770 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 TBX18O95935 607 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 FTCDO95954 541 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 IGHV4-34P06331 123 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 F7P08709 466 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 KRT19P08727 400 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ZDHHC11BP0C7U3 371 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ACADMP11310 421 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 GP1BBP13224 206 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 CD27P26842 260 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 EPHA8P29322 1005 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 GABRB2P47870 512 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF131P52739 623 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 UCNP55089 124 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 GTF2BQ00403 316 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 NAE1Q13564 534 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF234Q14588 700 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 HYIQ5T013 277 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 HECTD3Q5T447 861 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 TMEM215Q68D42 235 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 INO80CQ6PI98 192 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 NAGSQ8N159 534 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 SPATA6LQ8N4H0 392 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 CSGALNACT2Q8N6G5 542 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 LRRC52Q8N7C0 313 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 POC1AQ8NBT0 407 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 KCNE4Q8WWG9 221 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 RFFLQ8WZ73 363 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 SAAL1Q96ER3 474 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 TMEM19Q96HH6 336 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF578Q96N58 590 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 XPO6Q96QU8 1125 aaKnown RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 NR1H4Q96RI1 486 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 FAM110AQ9BQ89 295 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 MRPL45Q9BRJ2 306 aaKnown RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 DPEP3Q9H4B8 488 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 PPP1R3EQ9H7J1 279 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 EBF2Q9HAK2 575 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 BRF2Q9HAW0 419 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 MMP25Q9NPA2 562 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 ASCL3Q9NQ33 180 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 HINT3Q9NQE9 182 aaKnown RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 LARSQ9P2J5 1176 aaKnown RBP5.17□□□□□ -1.58
CLIP1-207ENST00000536634 CLEC4EQ9ULY5 219 aa5.17□□□□□ -1.58
CLIP1-207ENST00000536634 TDRD6O60522 2096 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 A0A1W2PNU3 283 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 VILLO15195 856 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SYNCRIPO60506 623 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 REC8O95072 547 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 WARSP23381 471 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 CPOXP36551 454 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 HARS2P49590 506 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 CDH8P55286 799 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SLC20A2Q08357 652 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 TRIM29Q14134 588 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 FGFBP1Q14512 234 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 CTF1Q16619 201 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 LINC00303Q3SY05 128 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SFMBT2Q5VUG0 894 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SNX30Q5VWJ9 437 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 ACAD10Q6JQN1 1059 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 UNQ6126/PRO20091Q6UXV3 157 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 TUBA1AQ71U36 451 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 GPBP1Q86WP2 473 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 ODF3L1Q8IXM7 274 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 NUP93Q8N1F7 819 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 OR5B17Q8NGF7 314 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SECTM1Q8WVN6 248 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 POMGNT1Q8WZA1 660 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 FIG4Q92562 907 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 ZUFSPQ96AP4 578 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 PIWIL1Q96J94 861 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SLC41A2Q96JW4 573 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 KCNK16Q96T55 309 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 TUBA1CQ9BQE3 449 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 FAM213AQ9BRX8 229 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 LHX5Q9H2C1 402 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 NDST4Q9H3R1 872 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 UBTD1Q9HAC8 227 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 PARVGQ9HBI0 331 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 SLC6A13Q9NSD5 602 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 STARD5Q9NSY2 213 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 OSER1Q9NX31 292 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 RBAKQ9NYW8 714 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 IL37Q9NZH6 218 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 EHD2Q9NZN4 543 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 WDR35Q9P2L0 1181 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 ITGA11Q9UKX5 1188 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 INTS6Q9UL03 887 aaKnown RBP5.16□□□□□ -1.58
CLIP1-207ENST00000536634 MKLN1Q9UL63 735 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 ODF2LQ9ULJ1 636 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 CEPT1Q9Y6K0 416 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 CAPN7Q9Y6W3 813 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 PDZD2O15018 2839 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 RP1P56715 2156 aa5.16□□□□□ -1.58
CLIP1-207ENST00000536634 MTORP42345 2549 aa5.15□□□□□ -1.58
CLIP1-207ENST00000536634 A0A0G2JPF8 293 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 A0A1B0GVC2 190 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 A0A1W2PR77 199 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms