RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ZNF41P51814 821 aaPredicted RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 CDH8P55286 799 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 EVCP57679 992 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 LINC01547P58512 204 aaPredicted RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 IKQ13123 557 aaPredicted RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 PPIGQ13427 754 aaKnown RBP eCLIP3.2□□□□□ -1.93e-6■□□□□ 9.8
USP48-215ENST00000534705 KYNUQ16719 465 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 DUOXA1Q1HG43 343 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 TMEM30BQ3MIR4 351 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 FILIP1LQ4L180 1135 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 ASPRV1Q53RT3 343 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 HSP90B2PQ58FF3 399 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 TECRLQ5HYJ1 363 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 KRT80Q6KB66 452 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 PET117Q6UWS5 81 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 CEACAM20Q6UY09 585 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 GBP6Q6ZN66 633 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 CHST3Q7LGC8 479 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 MFN1Q8IWA4 741 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 CCDC170Q8IYT3 715 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 WDTC1Q8N5D0 677 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 NCOA7Q8NI08 942 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 LGALS12Q96DT0 336 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 STAMBPL1Q96FJ0 436 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 CABS1Q96KC9 395 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 ZNF354BQ96LW1 612 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 RAB3IPQ96QF0 476 aaPredicted RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 TEX12Q9BXU0 123 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 FTOQ9C0B1 505 aaKnown RBP eCLIP3.2□□□□□ -1.9
USP48-215ENST00000534705 ABCG4Q9H172 646 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 RAD21L1Q9H4I0 556 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 ZNF696Q9H7X3 374 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 LY9Q9HBG7 655 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 C2orf42Q9NWW7 574 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 CHCHD3Q9NX63 227 aaKnown RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 CYP39A1Q9NYL5 469 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 MRPL15Q9P015 296 aaKnown RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 CPSF2Q9P2I0 782 aaKnown RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 MOSPD1Q9UJG1 213 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 ANAPC5Q9UJX4 755 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 FAM169AQ9Y6X4 670 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 NID2Q14112 1375 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 MYO7AQ13402 2215 aa3.2□□□□□ -1.9
USP48-215ENST00000534705 SPTBN5Q9NRC6 3674 aaKnown RBP3.2□□□□□ -1.9
USP48-215ENST00000534705 A0A1W2PR77 199 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 CCDC69A6NI79 296 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 TRIM64CA6NLI5 447 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 RTCAO00442 366 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 POLR3GO15318 223 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 MGRN1O60291 552 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 LDLRP01130 860 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 TFAP2AP05549 437 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 RB1P06400 928 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ATP5BP06576 529 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 RNF224P0DH78 156 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 HLA-DPA1P20036 260 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 SYT1P21579 422 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 GCH1P30793 250 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 HOXC8P31273 242 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 HPDP32754 393 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 HSPA4P34932 840 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 CAPZA2P47755 286 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ALDH3A2P51648 485 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 HSD17B4P51659 736 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 NR0B1P51843 470 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 PMP22Q01453 160 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 MBTD1Q05BQ5 628 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 MFAP5Q13361 173 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 DRP2Q13474 957 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 BAATQ14032 418 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 MEP1AQ16819 746 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 TPD52L1Q16890 204 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 LRRC26Q2I0M4 334 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 QRICH1Q2TAL8 776 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 C2orf76Q3KRA6 126 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 WDR38Q5JTN6 314 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 MFSD14CQ5VZR4 134 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ARHGAP17Q68EM7 881 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ABRAXAS1Q6UWZ7 409 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 CHST9Q7L1S5 443 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ARMCX2Q7L311 632 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 FAM228AQ86W67 206 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 METTL23Q86XA0 190 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 APLFQ8IW19 511 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 CEP97Q8IW35 865 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 GPALPP1Q8IXQ4 340 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 GBGT1Q8N5D6 347 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ZNF473Q8WTR7 871 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 DEPDC1BQ8WUY9 529 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 FAM162AQ96A26 154 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 THOC1Q96FV9 657 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 OXNAD1Q96HP4 312 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 TCEANC2Q96MN5 208 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ZNF396Q96N95 335 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 SMC6Q96SB8 1091 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 CITED2Q99967 270 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 DESI2Q9BSY9 194 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms