RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FAM83EQ2M2I3 478 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 TUBB8Q3ZCM7 444 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 SLCO4C1Q6ZQN7 724 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 PDSS2Q86YH6 399 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ZC3H7AQ8IWR0 971 aaKnown RBP14.56□□□□□ -0.08
CPSF1-210ENST00000532935 GALNT16Q8N428 558 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 AFAP1L2Q8N4X5 818 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ANKRD53Q8N9V6 530 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 TEX19Q8NA77 164 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 UHMK1Q8TAS1 419 aaKnown RBP14.56□□□□□ -0.08
CPSF1-210ENST00000532935 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ESAMQ96AP7 390 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 VPS50Q96JG6 964 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ATOH8Q96SQ7 321 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 PAFAH2Q99487 392 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 MESP1Q9BRJ9 268 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 CAPS2Q9BXY5 557 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ATP13A2Q9NQ11 1180 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 GPRC5BQ9NZH0 403 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ZNF451Q9Y4E5 1061 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 PCDHGB7Q9Y5F8 929 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 IKBKGQ9Y6K9 419 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 SUPT3HB4E1H0 165 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 J3QKU1 62 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 UBXN8O00124 270 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 ALOX12BO75342 701 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 H2AFYO75367 372 aaKnown RBP14.55□□□□□ -0.08
CPSF1-210ENST00000532935 RDH16O75452 317 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SUPT3HO75486 399 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 KLHL18O94889 574 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 BMP10O95393 424 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 HEXBP07686 556 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 ACPPP15309 386 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 CXCR2P25025 360 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 TYK2P29597 1187 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 CASRP41180 1078 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 MSH2P43246 934 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SERPINB9P50453 376 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SOX8P57073 446 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SLBPQ14493 270 aaKnown RBP eCLIP14.55□□□□□ -0.08
CPSF1-210ENST00000532935 MYBPC3Q14896 1274 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 HERC3Q15034 1050 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 PDK4Q16654 411 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 COLEC12Q5KU26 742 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 ATG9BQ674R7 924 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 TAOK1Q7L7X3 1001 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SNX31Q8N9S9 440 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 TRPV3Q8NET8 790 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 OR11G2Q8NGC1 345 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 RHEBL1Q8TAI7 183 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 C8orf44Q96CB5 159 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 SMAD5Q99717 465 aaKnown RBP14.55□□□□□ -0.08
CPSF1-210ENST00000532935 CD244Q9BZW8 370 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 HCN3Q9P1Z3 774 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 NAALAD2Q9Y3Q0 740 aa14.55□□□□□ -0.08
CPSF1-210ENST00000532935 CCDC189A1A4V9 331 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 SYCE1LA8MT33 242 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 MAP2K7O14733 419 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 CLGNO14967 610 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 CCNT2O60583 730 aaKnown RBP14.54□□□□□ -0.08
CPSF1-210ENST00000532935 JRKO75564 520 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 KLHL2O95198 593 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ABHD2P08910 425 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ZNF888P0CJ79 500 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ALOX12P18054 663 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ITGA3P26006 1051 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 GLRBP48167 497 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ACAP2Q15057 778 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 FAAH2Q6GMR7 532 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 TMIGD1Q6UXZ0 262 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 TRMT10CQ7L0Y3 403 aaKnown RBP14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ABHD13Q7L211 337 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 LRRC70Q7Z2Q7 622 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.54□□□□□ -0.08
CPSF1-210ENST00000532935 SHISA5Q8N114 240 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 KRT78Q8N1N4 520 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 OR51Q1Q8NH59 317 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 CREB3L4Q8TEY5 395 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 UBTD2Q8WUN7 234 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 DCAKDQ8WVC6 231 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ISL2Q96A47 359 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 SLC6A16Q9GZN6 736 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 EPN3Q9H201 632 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 VPS11Q9H270 941 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 EHD1Q9H4M9 534 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ZNF180Q9UJW8 692 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 MKL2Q9ULH7 1088 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 ASB1Q9Y576 335 aa14.54□□□□□ -0.08
CPSF1-210ENST00000532935 URADA6NGE7 173 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 ZNF860A6NHJ4 632 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 PCDH17O14917 1159 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 KLHL41O60662 606 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 GALR3O60755 368 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-210ENST00000532935 PRAMEF4O60810 478 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 KRT38O76015 456 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 B3GALT4O96024 378 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 HPP00738 406 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 SERPINA6P08185 405 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms