RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GRK3P35626 688 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 RPL5P46777 297 aaKnown RBP14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 RPS9P46781 194 aaKnown RBP14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 YPEL5P62699 121 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 RBBP4Q09028 425 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ELOAQ14241 798 aaKnown RBP14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 TEAD4Q15561 434 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC36A3Q495N2 470 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 KHDRBS2Q5VWX1 349 aaKnown RBP14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 GPR155Q7Z3F1 870 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ZDHHC13Q8IUH4 622 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 EPHX4Q8IUS5 362 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 DHRSXQ8N5I4 330 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 CDC26Q8NHZ8 85 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 FBXO30Q8TB52 745 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 NETO1Q8TDF5 533 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ZFP90Q8TF47 636 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 KLK6Q92876 244 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 VPS50Q96JG6 964 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 OR2M4Q96R27 311 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ADI1Q9BV57 179 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ASPSCR1Q9BZE9 553 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 OR51B5Q9H339 312 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 OSGEPL1Q9H4B0 414 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 EPB41L1Q9H4G0 881 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 TMEM184CQ9NVA4 438 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 SUFUQ9UMX1 484 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 ICKQ9UPZ9 632 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 GPSM3Q9Y4H4 160 aa14.16□□□□□ -0.14
ECHDC1-220ENST00000528402 SMIM31A0A1B0GVY4 71 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 A0A1W2PPV9 198 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 C1orf226A1L170 272 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 EIF4E1BA6NMX2 242 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 GNGT2O14610 69 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CLEC3AO75596 197 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 PRKD3O94806 890 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 KRT75O95678 551 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SERPINA1P01009 418 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CST1P01037 141 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 KLK1P06870 262 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 LINGO3P0C6S8 592 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 COL9A1P20849 921 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 RPL10P27635 214 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 PKLRP30613 574 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 KDELR2P33947 212 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SOX11P35716 441 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ALDH3A2P51648 485 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 FADDQ13158 208 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 HEPACAMQ14CZ8 416 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 TMEM35AQ53FP2 167 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CCNYL2Q5T2Q4 361 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ZCCHC8Q6NZY4 707 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ABRAXAS1Q6UWZ7 409 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC30A8Q8IWU4 369 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ZZZ3Q8IYH5 903 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ZCCHC7Q8N3Z6 543 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 OR4A15Q8NGL6 344 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ZFP28Q8NHY6 868 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 RGMAQ96B86 450 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MS4A8Q9BY19 250 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 KIR3DX1Q9H7L2 352 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SPASTQ9UBP0 616 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 PLAGL1Q9UM63 463 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 BTBD3Q9Y2F9 522 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MYRFQ9Y2G1 1151 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 HS3ST3A1Q9Y663 406 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MTCH2Q9Y6C9 303 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CHD9Q3L8U1 2897 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 TRBC2A0A5B9 178 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 PRSS38A1L453 326 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CAPN5O15484 640 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 DPM1O60762 260 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 H6PDO95479 791 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CLPTM1O96005 669 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 FUCA1P04066 466 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 COL4A2P08572 1712 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 HNRNPA2B1P22626 353 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 CAPGP40121 348 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MAGEA2P43356 314 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 TAS2R50P59544 299 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MYBPC1Q00872 1141 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 DAG1Q14118 895 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 NFATC4Q14934 902 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 RGNQ15493 299 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MLF2Q15773 248 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 RFX4Q33E94 735 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ADNP2Q6IQ32 1131 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 EIF3MQ7L2H7 374 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 VN1R5Q7Z5H4 357 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SYNPOQ8N3V7 929 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SLC44A3Q8N4M1 653 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 OR5K1Q8NHB7 308 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 FAM110BQ8TC76 370 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 TMBIM1Q969X1 311 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 AURKBQ96GD4 344 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms