RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PRPS1L1P21108 318 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ACRV1P26436 265 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 GRK5P34947 590 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 THOC7Q6I9Y2 204 aaKnown RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 GDPD3Q7L5L3 318 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SLC46A3Q7Z3Q1 461 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 OR8H2Q8N162 312 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 KCNS3Q9BQ31 491 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 CENPOQ9BU64 300 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 IMPAD1Q9NX62 359 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 QPCTLQ9NXS2 382 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 CLCA1A8K7I4 914 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 HAT1O14929 419 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SH3BP5O60239 455 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SOD2P04179 222 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 CASP9P55211 416 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ITGA1P56199 1179 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 DMPKQ09013 629 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SF1Q15637 639 aaKnown RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PTCHD3Q3KNS1 767 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 HECTD3Q5T447 861 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 DNAJB7Q7Z6W7 309 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PTOV1Q86YD1 416 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 CELF2-AS1Q8N7Q2 184 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF461Q8TAF7 563 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 UBTD2Q8WUN7 234 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 MAL2Q969L2 176 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PITX2Q99697 317 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SLX1AQ9BQ83 275 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ATG10Q9H0Y0 220 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 TPT1P8Q9HAU6 139 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 C14orf119Q9NWQ9 140 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 LHX3Q9UBR4 397 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 RAPGEFL1Q9UHV5 662 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 FZD4Q9ULV1 537 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 SLC22A14Q9Y267 594 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 YIPF1Q9Y548 306 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PEX16Q9Y5Y5 336 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 FRYLO94915 3013 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PNMA8CA0A1B0GUJ8 204 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 IDH3BO43837 385 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TBL1XO60907 577 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 CDK1P06493 297 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 AMD1P17707 334 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 GPX2P18283 190 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 SOX6P35712 828 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 SRSF11Q05519 484 aaKnown RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 CSTF3Q12996 717 aaKnown RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TBCEQ15813 527 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ADGRF1Q5T601 910 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 NEK5Q6P3R8 708 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ZSWIM9Q86XI8 627 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 DNAJC22Q8N4W6 341 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TCEAL4Q96EI5 215 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 RDH14Q9HBH5 336 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 KCTD5Q9NXV2 234 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 DUSP12Q9UNI6 340 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 LINC00854A0A1B0GVQ3 168 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 KRT87PA6NCN2 255 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 GAPDHSO14556 408 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 INPPL1O15357 1258 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ZW10O43264 779 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 COCHO43405 550 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 BNIP3LO60238 219 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 OPN1SWP03999 348 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ABCB1P08183 1280 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 BPIP17213 487 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 EPORP19235 508 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TNFRSF1BP20333 461 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 GGT2P36268 569 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 IFITM2Q01629 132 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 BCL2L1Q07817 233 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 ST3GAL4Q11206 333 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 MED22Q15528 200 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 FRG2Q64ET8 278 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 RNF165Q6ZSG1 346 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 TPGS1Q6ZTW0 290 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 MMAAQ8IVH4 418 aaKnown RBP12.06□□□□□ -0.48
CAPN1-208ENST00000527323 PIH1D2Q8WWB5 315 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 SPATA17Q96L03 361 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 FRG2BQ96QU4 278 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 BBS2Q9BXC9 721 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 GREB1Q4ZG55 1949 aa12.06□□□□□ -0.48
CAPN1-208ENST00000527323 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 TMEM189-UBE2V1I3L0A0 370 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 M0R129 80 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 RGS5O15539 181 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 STC2O76061 302 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 LAMP1P11279 417 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 POU2F1P14859 743 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 EPCAMP16422 314 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms