RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	KIF2A	O00139	706 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CLDN4	O14493	209 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	VCY	O14598	125 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SMAD9	O15198	467 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	POLR3G	O15318	223 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	E2F6	O75461	281 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CRCP	O75575	148 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	IDH1	O75874	414 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ACSL3	O95573	720 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	COL2A1	P02458	1487 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ETFA	P13804	333 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CYP2B6	P20813	491 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	GAL	P22466	123 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ACAT1	P24752	427 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CXCR3	P49682	368 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF84	P51523	738 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	EGR4	Q05215	589 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TCP10	Q12799	353 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SNTB2	Q13425	540 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TNK1	Q13470	666 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	GIT2	Q14161	759 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	PSME4	Q14997	1843 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CNGA3	Q16281	694 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	USH1G	Q495M9	461 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	NADK2	Q4G0N4	442 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SGO1	Q5FBB7	561 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	C1orf185	Q5T7R7	199 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ARHGAP17	Q68EM7	881 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM198B	Q6UWH4	519 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ARSK	Q6UWY0	536 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	RANBP10	Q6VN20	620 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	KLB	Q86Z14	1044 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	PDCL2	Q8N4E4	241 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	C12orf76	Q8N812	135 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	AMER3	Q8N944	861 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	EIF1AD	Q8N9N8	165 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	OR56B1	Q8NGI3	324 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	WDR20	Q8TBZ3	569 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FAR1	Q8WVX9	515 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FIG4	Q92562	907 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM46B	Q96A09	425 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SPDL1	Q96EA4	605 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC41A2	Q96JW4	573 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TTC25	Q96NG3	672 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	QRFPR	Q96P65	431 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SECISBP2	Q96T21	854 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CPNE1	Q99829	537 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SSX3	Q99909	188 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM110A	Q9BQ89	295 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF416	Q9BWM5	594 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	GTPBP2	Q9BX10	602 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	LSG1	Q9H089	658 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	STMN4	Q9H169	189 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	FN3K	Q9H479	309 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	LRRC40	Q9H9A6	602 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TBC1D17	Q9HA65	648 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF304	Q9HCX3	659 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	KCNMB3	Q9NPA1	279 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	PPAN	Q9NQ55	473 aa	Known RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	HYPK	Q9NX55	129 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	GDAP2	Q9NXN4	497 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SEMA5B	Q9P283	1151 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	UBQLN2	Q9UHD9	624 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ATP6V1H	Q9UI12	483 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TSPAN16	Q9UKR8	245 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	EXOC6B	Q9Y2D4	811 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	ZHX2	Q9Y6X8	837 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	A3GALT2	U3KPV4	340 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	SPACA6	W5XKT8	324 aa		4.08	□□□□□ -1.76
PCM1-223	ENST00000524356	CACNA1G	O43497	2377 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM157A	C9JC47	383 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	KBTBD13	C9JR72	458 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356		E9PBE3	544 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	MAP2K7	O14733	419 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CHAD	O15335	359 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	AP5Z1	O43299	807 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PRAMEF11	O60813	436 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	HSF2BP	O75031	334 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ATG13	O75143	517 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	GH2	P01242	217 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	HLA-DQA2	P01906	255 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PGK2	P07205	417 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CD63	P08962	238 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	TPM1	P09493	284 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	DANCR	P0C864	163 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	EPB41	P11171	864 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	G6PD	P11413	515 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	FGF3	P11487	239 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	FOSL2	P15408	326 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CSF2RA	P15509	400 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	DDX5	P17844	614 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	SRD5A1	P18405	259 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CD22	P20273	847 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	EEF1B2	P24534	225 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CYP2F1	P24903	491 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	NMBR	P28336	390 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PTPN6	P29350	595 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC6A6	P31641	620 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms