RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 EFCAB11Q9BUY7 163 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 PITHD1Q9GZP4 211 aaPredicted RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 CTSFQ9UBX1 484 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 MDC1Q14676 2089 aaKnown RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 ANKDD1BA6NHY2 528 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 STX16-NPEPL1H3BU86 382 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 E2F3O00716 465 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 STX16O14662 325 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP46-209ENST00000514536 TAC1P20366 129 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 FOLR3P41439 243 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 OCA2Q04671 838 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 LAPTM5Q13571 262 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SSPNQ14714 243 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 SHISA6Q6ZSJ9 500 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 AMER3Q8N944 861 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 TTLQ8NG68 377 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 OR2Y1Q8NGV0 311 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 CCT6BQ92526 530 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 EXTL1Q92935 676 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 CATSPER2Q96P56 530 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 KLHL31Q9H511 634 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SOX17Q9H6I2 414 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 IPPKQ9H8X2 491 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 COPG2Q9UBF2 871 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 TRPC4Q9UBN4 977 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 ZNF282Q9UDV7 671 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 SLC22A7Q9Y694 548 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 VSTM2BA6NLU5 285 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 A8MT66 165 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SGK494L7N484 410 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 DLX3O60479 287 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 GLRA3O75311 464 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 NSA2O95478 260 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 ITGB2P05107 769 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SERPINA6P08185 405 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 ZNF888P0CJ79 500 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 KRT4P19013 534 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 OTX2P32243 289 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 CCT5P48643 541 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 MAT1AQ00266 395 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 HYAL2Q12891 473 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 DSG2Q14126 1118 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 E2F2Q14209 437 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 SYT16Q17RD7 645 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 VWA2Q5GFL6 755 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 TOR1AIP1Q5JTV8 583 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 ADNP2Q6IQ32 1131 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 MYLK4Q86YV6 388 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 PRSS58Q8IYP2 241 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 RIBC1Q8N443 379 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 STT3BQ8TCJ2 826 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 UTP15Q8TED0 518 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 TTC9Q92623 222 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 MIEF2Q96C03 454 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 NSUN5Q96P11 429 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 SLC6A16Q9GZN6 736 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 NOL11Q9H8H0 719 aaKnown RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 WDR54Q9H977 334 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 ACTR8Q9H981 624 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 RRAGDQ9NQL2 400 aaPredicted RBP13.24□□□□□ -0.29
USP46-209ENST00000514536 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 POLHQ9Y253 713 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 NAALAD2Q9Y3Q0 740 aa13.24□□□□□ -0.29
USP46-209ENST00000514536 H0YIG0 161 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 COPEO14579 308 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 KLHL18O94889 574 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 B3GALT4O96024 378 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 UMODP07911 640 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 ZGLP1P0C6A0 271 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 ALOX12P18054 663 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 CRHR1P34998 444 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 PIK3CGP48736 1102 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 RAB8AP61006 207 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 SLC18A2Q05940 514 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 HERC3Q15034 1050 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 DEFB134Q4QY38 66 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 MED27Q6P2C8 311 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 RPS27LQ71UM5 84 aaKnown RBP13.23□□□□□ -0.29
USP46-209ENST00000514536 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 PDSS2Q86YH6 399 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 AFAP1L2Q8N4X5 818 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 THAP4Q8WY91 577 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 UBE2E3Q969T4 207 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 SPSB2Q99619 263 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms