RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 STRAPQ9Y3F4 350 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-223ENST00000514267 NUP160Q12769 1436 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 NCOA1Q15788 1441 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 C9orf84Q5VXU9 1444 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ATP10BO94823 1461 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SAA2-SAA4A0A096LPE2 208 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 C2orf92A0A1B0GVN3 265 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TMEM129A0AVI4 362 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 MAGEB16A2A368 324 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 IFITM10A6NMD0 228 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 NDC80O14777 642 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CPLX1O14810 134 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 RASGRF2O14827 1237 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SSX5O60225 188 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 HSF2BPO75031 334 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 KRT33AO76009 404 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TRIM16O95361 564 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 RAF1P04049 648 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 IGHV4-31P0DP07 118 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CD59P13987 128 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 FERP16591 822 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CDH3P22223 829 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ACP1P24666 158 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 HPDP32754 393 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CSTF2P33240 577 aaKnown RBP eCLIP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SFTPDP35247 375 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ASMTP46597 345 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 RPP38P78345 283 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SLC3A1Q07837 685 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TAF7Q15545 349 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PTPN14Q15678 1187 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 UGP2Q16851 508 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 C12orf60Q5U649 245 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PM20D1Q6GTS8 502 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PSRC1Q6PGN9 363 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ABRAXAS1Q6UWZ7 409 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 MFSD7Q6UXD7 560 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TUBA1AQ71U36 451 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 BTN2A1Q7KYR7 527 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PRUNE1Q86TP1 453 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 NLRP14Q86W24 1093 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TMEM126BQ8IUX1 230 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 LMNTD2Q8IXW0 634 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CDK20Q8IZL9 346 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 KDM8Q8N371 416 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 METTL27Q8N6F8 245 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TMEM99Q8N816 258 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CLEC1AQ8NC01 280 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PRCCQ92733 491 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SLCO4A1Q96BD0 722 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 C14orf79Q96F83 325 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SLC47A1Q96FL8 570 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ZNF560Q96MR9 790 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TSGA13Q96PP4 275 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 PRMT1Q99873 361 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 TUBA1CQ9BQE3 449 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CPVLQ9H3G5 476 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 A4GALTQ9NPC4 353 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 SDR39U1Q9NRG7 319 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 FLRT3Q9NZU0 649 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 KCNN3Q9UGI6 736 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 MAN1B1Q9UKM7 699 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 KCNJ14Q9UNX9 436 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 KCNK6Q9Y257 313 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ZNF510Q9Y2H8 683 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ARHGAP5Q13017 1502 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 CKAP5Q14008 2032 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ANKRD30BQ9BXX2 1392 aa3.12□□□□□ -1.91
CALCOCO2-223ENST00000514267 ADCY10Q96PN6 1610 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 ANKRD50Q9ULJ7 1429 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 KIAA1107Q9UPP5 1409 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 RPRD2Q5VT52 1461 aaKnown RBP3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 LOC101059948A0A1B0GTJ6 334 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 ANKDD1BA6NHY2 528 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 H0YIG0 161 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 M0R296 226 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 BMPR1BO00238 502 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 GRAP2O75791 330 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 REC8O95072 547 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 SLC4A1P02730 911 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 YES1P07947 543 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 AREGP15514 252 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 ZNF18P17022 549 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 AMD1P17707 334 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 MSH3P20585 1137 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 EPHA2P29317 976 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 SSTR1P30872 391 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 KIF5BP33176 963 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 CETN2P41208 172 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 DLX5P56178 289 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 LCP2Q13094 533 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 DMP1Q13316 513 aaPredicted RBP3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 OPCMLQ14982 345 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 ARMCX4Q5H9R4 360 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 SIRPB2Q5JXA9 342 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 C20orf194Q5TEA3 1177 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 TTC27Q6P3X3 843 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 CTR9Q6PD62 1173 aa3.11□□□□□ -1.91
CALCOCO2-223ENST00000514267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms