RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	RTKN	Q9BST9	563 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	NLN	Q9BYT8	704 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	ACPT	Q9BZG2	426 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	FANCE	Q9HB96	536 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	PRM3	Q9NNZ6	103 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	ENAM	Q9NRM1	1142 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	RIC8B	Q9NVN3	520 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	NMRK1	Q9NWW6	199 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	KLHL14	Q9P2G3	628 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	CCL27	Q9Y4X3	112 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	PTGDR2	Q9Y5Y4	395 aa		11.42	□□□□□ -0.58
RACK1-223	ENST00000510199	LRIT2	A6NDA9	550 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SDHD	O14521	159 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	ZSCAN9	O15535	394 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	RSL1D1	O76021	490 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	FAM107A	O95990	144 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	TGFB1	P01137	390 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SERPIND1	P05546	499 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	FOLR1	P15328	257 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	PRPH2	P23942	346 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	VSX2	P58304	361 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	STXBP1	P61764	594 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	HYAL2	Q12891	473 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	C16orf72	Q14CZ0	275 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	ISX	Q2M1V0	245 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	ADPRM	Q3LIE5	342 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	TMEM35A	Q53FP2	167 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	WASHC2D	Q5SRD0	308 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	VWA5B1	Q5TIE3	1220 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CYB5D1	Q6P9G0	228 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CHSY3	Q70JA7	882 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CACTIN-AS1	Q8N1I8	211 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CSNK1A1L	Q8N752	337 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	OR2T11	Q8NH01	316 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	RFWD2	Q8NHY2	731 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	THOC1	Q96FV9	657 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	METTL2A	Q96IZ6	378 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	PPP1R36	Q96LQ0	422 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CCT8L2	Q96SF2	557 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	ELAC2	Q9BQ52	826 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	STRADB	Q9C0K7	418 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SLC6A16	Q9GZN6	736 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	FAM107B	Q9H098	131 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	KCNK13	Q9HB14	408 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	FGF21	Q9NSA1	209 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SIDT1	Q9NXL6	827 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	VPS29	Q9UBQ0	182 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	DCTN4	Q9UJW0	460 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SERTAD3	Q9UJW9	196 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	SLC12A4	Q9UP95	1085 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199	CLCA2	Q9UQC9	943 aa		11.41	□□□□□ -0.58
RACK1-223	ENST00000510199		A0A0G2JND7	137 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ATP6AP2	A0A1C7CYW4	349 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	FITM1	A5D6W6	292 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	URAD	A6NGE7	173 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	TMEM150C	B9EJG8	249 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199		H3BMH7	237 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	LSM1	O15116	133 aa	Known RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	P2RX6	O15547	441 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SNX3	O60493	162 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	DIAPH2	O60879	1101 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	CS	O75390	466 aa	Known RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ATP6AP2	O75787	350 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SEMA3D	O95025	777 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	KCNK5	O95279	499 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ETHE1	O95571	254 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	EIF2S1	P05198	315 aa	Known RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	IDH3A	P50213	366 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ARFIP2	P53365	341 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ARFIP1	P53367	373 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	HMGCS1	Q01581	520 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	TUBB3	Q13509	450 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	NR6A1	Q15406	480 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	GPR19	Q15760	415 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SMU1	Q2TAY7	513 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	PRTG	Q2VWP7	1150 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SLC9B1	Q4ZJI4	515 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	TOR1AIP1	Q5JTV8	583 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SPDYA	Q5MJ70	313 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	HES3	Q5TGS1	186 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ACAD11	Q709F0	780 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	5e-28	■□□□□ 11.3
RACK1-223	ENST00000510199	SPATA21	Q7Z572	469 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	PIGW	Q7Z7B1	504 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	BPHL	Q86WA6	291 aa	Predicted RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	SRFBP1	Q8NEF9	429 aa	Known RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	OR8K5	Q8NH50	307 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	CEP70	Q8NHQ1	597 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ACTRT2	Q8TDY3	377 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	TUBGCP3	Q96CW5	907 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	ZNF501	Q96CX3	271 aa	Predicted RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	MS4A6E	Q96DS6	147 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	LIN37	Q96GY3	246 aa	Predicted RBP	11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	PPP3R2	Q96LZ3	170 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	F2RL3	Q96RI0	385 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	CMKLR1	Q99788	373 aa		11.4	□□□□□ -0.58
RACK1-223	ENST00000510199	EBF4	Q9BQW3	602 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms