RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CPNE7Q9UBL6 633 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SNX13Q9Y5W8 968 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ACTL7BQ9Y614 415 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BTBD17A6NE02 478 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C1QTNF9BB2RNN3 333 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLCO1B7G3V0H7 640 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PYCARD-AS1I3L0S3 204 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TPST1O60507 370 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MFAP3LO75121 409 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SOCS5O75159 536 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DEAF1O75398 565 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ACTL6BO94805 426 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FARS2O95363 451 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 AGTP01019 485 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C1QTNF9P0C862 333 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CBSLP0DN79 551 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF823P16415 610 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CRABP2P29373 138 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CBSP35520 551 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GPLD1P80108 840 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDK3Q00526 305 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DMPKQ09013 629 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BNIP3Q12983 259 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RUNX2Q13950 521 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LRP8Q14114 963 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LARS2Q15031 903 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OCLNQ16625 522 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BTBD16Q32M84 506 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RFTN2Q52LD8 501 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SPATA46Q5T0L3 261 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SCARA3Q6AZY7 606 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 METAP1DQ6UB28 335 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC22A15Q8IZD6 547 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OR8H2Q8N162 312 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CRYBG2Q8N1P7 616 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ANKFN1Q8N957 763 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 STAG3L4Q8TBR4 150 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LRRC15Q8TF66 581 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GINS4Q9BRT9 223 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FGFBP2Q9BYJ0 223 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM2Q9C040 744 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ROGDIQ9GZN7 287 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C10orf88Q9H8K7 445 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 STARD5Q9NSY2 213 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CKLFQ9UBR5 152 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GHRLQ9UBU3 117 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ARL2BPQ9Y2Y0 163 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ATP6AP2A0A1C7CYW4 349 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A1L4Q6 167 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AGPSO00116 658 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CBFA2T3O75081 653 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GLRA3O75311 464 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ATP6AP2O75787 350 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AGR2O95994 175 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CSTBP04080 98 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EBLN1P0CF75 366 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AHCYP23526 432 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ADSLP30566 484 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMED10P49755 219 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CDKN1CP49918 316 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CHN2P52757 468 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NME5P56597 212 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GALK2Q01415 458 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM115Q12893 351 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRAF2Q12933 501 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CHRNA6Q15825 494 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SNCBQ16143 134 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PTPRNQ16849 979 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EXOC3L2Q2M3D2 409 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FAM153CQ494X1 144 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KIAA1614Q5VZ46 1190 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SHISA6Q6ZSJ9 500 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ADAMTSL2Q86TH1 951 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KCNMB4Q86W47 210 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ULK2Q8IYT8 1036 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NXPE1Q8N323 547 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SLC5A8Q8N695 610 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GATAD2BQ8WXI9 593 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MARVELD3Q96A59 401 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MYRFLQ96LU7 910 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TEFMQ96QE5 360 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MCMBPQ9BTE3 642 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL4Q9C0H6 718 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM168Q9H0V1 697 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MVB12BQ9H7P6 319 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PTGFRNQ9P2B2 879 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AMACRQ9UHK6 382 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PPT2Q9UMR5 302 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SPIN1Q9Y657 262 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A0A0J9YY10 115 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TEX51A0A1B0GUA7 166 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A0A1W2PPC4 97 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRABD2BA6NFA1 517 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PRRG2O14669 202 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TP53I11O14683 189 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GSC2O15499 205 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MFSD11O43934 449 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 HCN1O60741 890 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MTX2O75431 263 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 POP7O75817 140 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms