RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 SOX17Q9H6I2 414 aaPredicted RBP12.87□□□□□ -0.35
PDCD6-204ENST00000506909 NT5DC2Q9H857 520 aa12.87□□□□□ -0.35
PDCD6-204ENST00000506909 ACSS2Q9NR19 701 aa12.87□□□□□ -0.35
PDCD6-204ENST00000506909 SEMA3GQ9NS98 782 aa12.87□□□□□ -0.35
PDCD6-204ENST00000506909 C14orf105Q9NVL8 296 aa12.87□□□□□ -0.35
PDCD6-204ENST00000506909 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
PDCD6-204ENST00000506909 TENM4Q6N022 2769 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 URADA6NGE7 173 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 AGPSO00116 658 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 PEX12O00623 359 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 CCNT2O60583 730 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 CEACAM4O75871 244 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 DNAJB5O75953 348 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 SERPINA6P08185 405 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 RBP1P09455 135 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 CASP2P42575 452 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 GLRBP48167 497 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 SNRPNP63162 240 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 RGS1Q08116 209 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 HERC3Q15034 1050 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 TECRLQ5HYJ1 363 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 CPZQ66K79 652 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 TMIGD1Q6UXZ0 262 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 TIFABQ6ZNK6 161 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 GSPT2Q8IYD1 628 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 AFAP1L2Q8N4X5 818 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 OR9A4Q8NGU2 314 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 PTCD3Q96EY7 689 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 VPS50Q96JG6 964 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 CCDC77Q9BR77 488 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 ANKZF1Q9H8Y5 726 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 ANKHQ9HCJ1 492 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 ASB1Q9Y576 335 aa12.86□□□□□ -0.35
PDCD6-204ENST00000506909 PCDHGA9Q9Y5G4 932 aaKnown RBP12.86□□□□□ -0.35
PDCD6-204ENST00000506909 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 B8ZZF3 427 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 K7EPI3 171 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SOCS6O14544 535 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 PCDH17O14917 1159 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 WFS1O76024 890 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SMIM10L1P0DMW3 83 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 IL1RNP18510 177 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 EPORP19235 508 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 CCL11P51671 97 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 ALDH18A1P54886 795 aaKnown RBP12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SOX8P57073 446 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SKP1P63208 163 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 HYAL2Q12891 473 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 CHAF1BQ13112 559 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 LAPTM5Q13571 262 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 DOC2AQ14183 400 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SLBPQ14493 270 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDCD6-204ENST00000506909 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SETDB1Q15047 1291 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 PCBP2Q15366 365 aaKnown RBP eCLIP12.85□□□□□ -0.358e-7■■■■■ 46.6
PDCD6-204ENST00000506909 TBCCQ15814 346 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 METTL2BQ6P1Q9 378 aaKnown RBP12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SHISA6Q6ZSJ9 500 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 PRSS41Q7RTY9 318 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SNX31Q8N9S9 440 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 CREB3L4Q8TEY5 395 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SMIM10Q96HG1 83 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 YIPF2Q9BWQ6 316 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 CLK4Q9HAZ1 481 aaKnown RBP12.85□□□□□ -0.35
PDCD6-204ENST00000506909 ZNF358Q9NW07 568 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 OPTCQ9UBM4 332 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 TMCO1Q9UM00 188 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 HS3ST3B1Q9Y662 390 aa12.85□□□□□ -0.35
PDCD6-204ENST00000506909 SPTA1P02549 2419 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 IQANK1A0A1B0GTG1 560 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 IDSB3KWA1 339 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 SGK494L7N484 410 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 GALR3O60755 368 aaPredicted RBP12.84□□□□□ -0.35
PDCD6-204ENST00000506909 KLHL18O94889 574 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 SLU7O95391 586 aaKnown RBP12.84□□□□□ -0.35
PDCD6-204ENST00000506909 BMP10O95393 424 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 SERPIND1P05546 499 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 CYC1P08574 325 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 GFAPP14136 432 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 EPB42P16452 691 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 ALOX12P18054 663 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 IL10P22301 178 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 AGTR2P50052 363 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 EMP2P54851 167 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
PDCD6-204ENST00000506909 IRF8Q02556 426 aa12.84□□□□□ -0.35
PDCD6-204ENST00000506909 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms