RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CCNYL3P0C7X3 344 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 CTPS1P17812 591 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 WNT3P56703 355 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 HOXC5Q00444 222 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 RHAGQ02094 409 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 RUNX1T1Q06455 604 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 HKDC1Q2TB90 917 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 CCNJQ5T5M9 372 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 SAXO2Q658L1 398 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 FAM131AQ6UXB0 335 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 CD300LGQ6UXG3 332 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 PAMR1Q6UXH9 720 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 RASAL3Q86YV0 1011 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 GDPD1Q8N9F7 314 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 TLR8Q9NR97 1041 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 TMPRSS11EQ9UL52 423 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 LSM2Q9Y333 95 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 AP1M2Q9Y6Q5 423 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 PLXNA3P51805 1871 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 A8MVJ9 347 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 M0QZQ0 153 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 TEX28O15482 410 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 PLA2G10O15496 165 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 NOS1APO75052 506 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 CSF2P04141 144 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 PCSK2P16519 638 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 EPORP19235 508 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 ALAS2P22557 587 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 ITGB7P26010 798 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 MAPK1P28482 360 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 TGM4P49221 684 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 RGS4P49798 205 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 VEPH1Q14D04 833 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 LARS2Q15031 903 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 MICAQ29983 383 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 MARVELD3Q96A59 401 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 TRMT61AQ96FX7 289 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 EXOC2Q96KP1 924 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 SPATA17Q96L03 361 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 VPS35Q96QK1 796 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 UCK2Q9BZX2 261 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 MCOLN1Q9GZU1 580 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 CHST8Q9H2A9 424 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 MIXL1Q9H2W2 232 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 ZNF556Q9HAH1 456 aa16.48■□□□□ 0.23
SQSTM1-211ENST00000506690 LEUTXA8MZ59 168 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ANKRD66B4E2M5 251 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CDK2AP1O14519 115 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 AKR7A2O43488 359 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SLC10A3P09131 477 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 NUDT7P0C024 238 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CYP2A6P11509 494 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ZNF30P17039 623 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CBLP22681 906 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 PTX3P26022 381 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 PTPRRQ15256 657 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 QPRTQ15274 297 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ZNF467Q7Z7K2 595 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SCN4BQ8IWT1 228 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SELENOMQ8WWX9 145 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CMTM7Q96FZ5 175 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 APIPQ96GX9 242 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CINPQ9BW66 212 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SPATA9Q9BWV2 254 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 NARFLQ9H6Q4 476 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SEC14L4Q9UDX3 406 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 TBX18O95935 607 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CYP17A1P05093 508 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 PIPP12273 146 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 SOX3P41225 446 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 GPR19Q15760 415 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ZNF648Q5T619 568 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 LAMTOR1Q6IAA8 161 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 LGI4Q8N135 537 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 LKAAEAR1Q8TD35 194 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 MSLNLQ96KJ4 702 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 GTPBP2Q9BX10 602 aaKnown RBP16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 ABCB9Q9NP78 766 aa16.47■□□□□ 0.23
SQSTM1-211ENST00000506690 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 STK16O75716 305 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 OR2B3O76000 313 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 CCNB2O95067 398 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 ACPPP15309 386 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 POLR2CP19387 275 aaPredicted RBP16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 PRPS1L1P21108 318 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 PSMA1P25786 263 aaKnown RBP16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 CDC42P60953 191 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 CACNG1Q06432 222 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 CCL15Q16663 113 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 UGT8Q16880 541 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 TATDN3Q17R31 274 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 BTBD16Q32M84 506 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 PTCHD3Q3KNS1 767 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 PTRHD1Q6GMV3 140 aaKnown RBP16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 NADSYN1Q6IA69 706 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 THEM5Q8N1Q8 247 aa16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 NLGN4YQ8NFZ3 816 aaPredicted RBP16.46■□□□□ 0.23
SQSTM1-211ENST00000506690 HASPINQ8TF76 798 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms