RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MOCOSQ96EN8 888 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 PRAP1Q96NZ9 151 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 ACPTQ9BZG2 426 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC52A3Q9NQ40 469 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 LANCL2Q9NS86 450 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 FAM8A1Q9UBU6 413 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 CES1P1Q9UKY3 287 aa7.88□□□□□ -1.15
CDC42SE2-208ENST00000505065 LOC102723996A0A087X1L8 192 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CHRNGP07510 517 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 HBQ1P09105 142 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 HOXB9P17482 250 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 IL10P22301 178 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 PDE7AQ13946 482 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 GPR19Q15760 415 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 DEPDC1Q5TB30 811 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF793Q6ZN11 406 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 LARP4Q71RC2 724 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 RAB11FIP2Q7L804 512 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 TIPARPQ7Z3E1 657 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SCUBE1Q8IWY4 988 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRIM42Q8IWZ5 723 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 FAM20CQ8IXL6 584 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 OR2L5Q8NG80 312 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 HUS1BQ8NHY5 278 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 REPS1Q96D71 796 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SPRTNQ9H040 489 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SRPK3Q9UPE1 567 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 WBP11Q9Y2W2 641 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ASB4Q9Y574 426 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 DCDC2BA2VCK2 349 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SMIM23A6NLE4 172 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CYR61O00622 381 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 STAT5AP42229 794 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 NAGLUP54802 743 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 BST1Q10588 318 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 IFT88Q13099 833 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KCNAB1Q14722 419 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SF1Q15637 639 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KHDRBS2Q5VWX1 349 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 FRG2Q64ET8 278 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 IRGCQ6NXR0 463 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 RPS27LQ71UM5 84 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 AHCYL2Q96HN2 611 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 FRG2BQ96QU4 278 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CMKLR1Q99788 373 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CIDEBQ9UHD4 219 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 EXO1Q9UQ84 846 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 MRPS2Q9Y399 296 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 GSAPA4D1B5 854 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SYNDIG1LA6NDD5 238 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 EFCAB7A8K855 629 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 PLPP1O14494 284 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CCNT2O60583 730 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 PDYNP01213 254 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 GFAPP14136 432 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ARSFP54793 590 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 DSG2Q14126 1118 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 RIMKLAQ8IXN7 391 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KRT78Q8N1N4 520 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 GBP7Q8N8V2 638 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ESAMQ96AP7 390 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 PHF21BQ96EK2 531 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 TSNARE1Q96NA8 513 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 FGF21Q9NSA1 209 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 UNC13CQ8NB66 2214 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CABIN1Q9Y6J0 2220 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 EDF1O60869 148 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KLF7O75840 302 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC1A6P48664 564 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 CLDN6P56747 220 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ABHD18Q0P651 414 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KRT33BQ14525 404 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZRSR2Q15696 482 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 HKDC1Q2TB90 917 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 USP53Q70EK8 1073 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 MED8Q96G25 268 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 BRINP2Q9C0B6 783 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 KLHL31Q9H511 634 aa7.87□□□□□ -1.15
CDC42SE2-208ENST00000505065 A0A087WV48 116 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 NCF1BA6NI72 391 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 GOLGA6L10A6NI86 522 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 NCF1CA8MVU1 366 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 NCF1P14598 390 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 CDH3P22223 829 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 ABRAXAS2Q15018 415 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 LCN10Q6JVE6 187 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 EPGNQ6UW88 154 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 TMPRSS11BQ86T26 416 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 CLYBLQ8N0X4 340 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 CAMKVQ8NCB2 501 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 RCBTB1Q8NDN9 531 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 ACTRT2Q8TDY3 377 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 NXPE2Q96DL1 559 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 CMTM7Q96FZ5 175 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 SELENOSQ9BQE4 189 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 MANSC1Q9H8J5 431 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 TAS2R7Q9NYW3 318 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 A0A1B0GX78 115 aa7.86□□□□□ -1.15
CDC42SE2-208ENST00000505065 FEZF1A0PJY2 475 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms