RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RBBP7Q16576 425 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 HIST2H2ACQ16777 129 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-212ENST00000495497 NDUFA9Q16795 377 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ATP1A1-AS1Q5TC04 95 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 HIST2H2AA3Q6FI13 130 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 GRHL2Q6ISB3 625 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 METTL2BQ6P1Q9 378 aaKnown RBP18.47■□□□□ 0.55
HDAC4-212ENST00000495497 EXOC3L1Q86VI1 746 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ARMC2Q8NEN0 867 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 TRPV3Q8NET8 790 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 OR9A4Q8NGU2 314 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 TRPC4APQ8TEL6 797 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 STARD8Q92502 1023 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 COL26A1Q96A83 441 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 C1QTNF3Q9BXJ4 246 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ERVK-6Q9BXR3 956 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 DRC3Q9H069 523 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 IQCGQ9H095 443 aaKnown RBP18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ACTL8Q9H568 366 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ZNF304Q9HCX3 659 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 COPG2Q9UBF2 871 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 GPN3Q9UHW5 284 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-212ENST00000495497 PLLPQ9Y342 182 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ZZEF1O43149 2961 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 ANKDD1BA6NHY2 528 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 C21orf140B9A014 251 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 C4orf51C9J302 202 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 C9J4A7 227 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 SUPT7LO94864 414 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 TBX6O95947 436 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-212ENST00000495497 RAB40ALP0C0E4 278 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 ZNF888P0CJ79 500 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-212ENST00000495497 CPA3P15088 417 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 IMPDH1P20839 514 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PTPN4P29074 926 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 ARL1P40616 181 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PIK3CGP48736 1102 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 UCNP55089 124 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 RGS1Q08116 209 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 NCF4Q15080 339 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 SYT16Q17RD7 645 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PAGE2BQ5JRK9 111 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 TOR1AIP1Q5JTV8 583 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 LIPJQ5W064 366 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 MED27Q6P2C8 311 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PDSS2Q86YH6 399 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 SLC22A9Q8IVM8 553 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 RNF175Q8N4F7 328 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 TCP10LQ8TDR4 215 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 SLC45A3Q96JT2 553 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 FAM111AQ96PZ2 611 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 EFHD1Q9BUP0 239 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PRM3Q9NNZ6 103 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 KCND3Q9UK17 655 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 PCDHGA6Q9Y5G7 932 aa18.46■□□□□ 0.55
HDAC4-212ENST00000495497 K7ENP7 123 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 SGK494L7N484 410 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 SH3BGRLO75368 114 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 SERPINA6P08185 405 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 PRKAR1AP10644 381 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 FBLP22087 321 aaKnown RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 RAB8AP61006 207 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 MAT1AQ00266 395 aaKnown RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 CLCQ05315 142 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 VAC14Q08AM6 782 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 TRAF3Q13114 568 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 FAM53BQ14153 422 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 ERV3-1Q14264 604 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 CPSF6Q16630 551 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 TNFAIP8L3Q5GJ75 292 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 MRPL14Q6P1L8 145 aaKnown RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 PRMT9Q6P2P2 845 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 INO80CQ6PI98 192 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 SHISA6Q6ZSJ9 500 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 LAS2Q8IYD9 372 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 CCNYL1Q8N7R7 359 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 L3MBTL4Q8NA19 623 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 TTLQ8NG68 377 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 OR7G3Q8NG95 312 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 UTP15Q8TED0 518 aaKnown RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 PPP4R1Q8TF05 950 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 YIPF2Q9BWQ6 316 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 GPR87Q9BY21 358 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 SLC6A16Q9GZN6 736 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 PITHD1Q9GZP4 211 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 RHBGQ9H310 441 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 ANKHQ9HCJ1 492 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 CTSFQ9UBX1 484 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 CFAP47Q6ZTR5 3102 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 USP24Q9UPU5 2620 aa18.45■□□□□ 0.54
HDAC4-212ENST00000495497 ANKRD11Q6UB99 2663 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-212ENST00000495497 ZNF860A6NHJ4 632 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 TYROBPO43914 113 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 DNAJB6O75190 326 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 CLEC3AO75596 197 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 CREG1O75629 220 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 CLDN9O95484 217 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 ONECUT2O95948 504 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 FURINP09958 794 aa18.44■□□□□ 0.54
HDAC4-212ENST00000495497 PIM1P11309 404 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms