RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ERVK13-1Q9NX77 482 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 WWP2O00308 870 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 PPM1DO15297 605 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 OR1F1O43749 312 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 PRAMEF4O60810 478 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 ATG13O75143 517 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 TTKP33981 857 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 MAGEA10P43363 369 aaPredicted RBP12.96□□□□□ -0.33
GPC1-209ENST00000495100 TGM4P49221 684 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 EMP3P54852 163 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 RAB8AP61006 207 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 TBPL1P62380 186 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 UGT8Q16880 541 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 PRAMEF9Q5VWM5 478 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 ALG1LQ6GMV1 187 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 B3GLCTQ6Y288 498 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 OR7G3Q8NG95 312 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 LGALS12Q96DT0 336 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 FUOMA2VDF0 154 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 H3BSH0 61 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 SLC31A1O15431 190 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 HYAL3O43820 417 aaPredicted RBP12.96□□□□□ -0.34
GPC1-209ENST00000495100 GMFGO60234 142 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.34
GPC1-209ENST00000495100 C1SP09871 688 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 PRPS1L1P21108 318 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 GADD45AP24522 165 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 KRT20P35900 424 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 CSRP3P50461 194 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 CLDN8P56748 225 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 HBA1P69905 142 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 ADARB1P78563 741 aaKnown RBP12.96□□□□□ -0.34
GPC1-209ENST00000495100 SCARB2Q14108 478 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.34
GPC1-209ENST00000495100 CHPFQ8IZ52 775 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 SCML4Q8N228 414 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 AQP11Q8NBQ7 271 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 KCT2Q8NC54 265 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 OR8J3Q8NGG0 315 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 COL21A1Q96P44 957 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 QRSL1Q9H0R6 528 aaKnown RBP12.96□□□□□ -0.34
GPC1-209ENST00000495100 SIRT5Q9NXA8 310 aa12.96□□□□□ -0.34
GPC1-209ENST00000495100 FAM92AA1XBS5 289 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 PCDH17O14917 1159 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CSF2P04141 144 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 IL3P08700 152 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 NR2F1P10589 423 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 ACP5P13686 325 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 ID2Q02363 134 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 ST3GAL4Q11206 333 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 GAB1Q13480 694 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 GLB1L3Q8NCI6 653 aaPredicted RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 TBX5Q99593 518 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 TDP1Q9NUW8 608 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 OR1A2Q9Y585 309 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 KPNA4O00629 521 aaPredicted RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 YY2O15391 372 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 SGTAO43765 313 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CCNDBP1O95273 360 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 CRISP3P54108 245 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 MESP2Q0VG99 397 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 NPRL3Q12980 569 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 GPR33Q49SQ1 333 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CPZQ66K79 652 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 MED27Q6P2C8 311 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CEACAM20Q6UY09 585 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 OR5D16Q8NGK9 328 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 KCNH6Q9H252 994 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 RP1P56715 2156 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 TDRD15B5MCY1 1934 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 A0A1W2PRB8 838 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 TRBC2A0A5B9 178 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 PRPS2P11908 318 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 SDHBP21912 280 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 DNAJA1P31689 397 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 ZFP36L2P47974 494 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 INPP1P49441 399 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 DMPKQ09013 629 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 TSTQ16762 297 aaKnown RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 GPAT3Q53EU6 434 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CAPN13Q6MZZ7 669 aaPredicted RBP12.95□□□□□ -0.34
GPC1-209ENST00000495100 DCDC5Q6ZRR9 648 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CROCCP3Q8IVE0 287 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 SLC7A5P1Q8MH63 180 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms