RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TBC1D3GQ6DHY5 549 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 OR52E8Q6IFG1 317 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 FAM71E1Q6IPT2 247 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 TBC1D3CQ6IPX1 549 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 IKBIPQ70UQ0 350 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SERPINA11Q86U17 422 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PTOV1Q86YD1 416 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 TBC1D3Q8IZP1 549 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SLC44A3Q8N4M1 653 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 CBR4Q8N4T8 237 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 RAB42Q8N4Z0 105 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 OR52E1Q8NGJ3 308 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 FBXO30Q8TB52 745 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 C16orf78Q8WTQ4 265 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SLC47A1Q96FL8 570 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PHF12Q96QT6 1004 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 FERD3LQ96RJ6 166 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SORBS1Q9BX66 1292 aaKnown RBP10.21□□□□□ -0.77
CLCN6-208ENST00000494028 OSBPL11Q9BXB4 747 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 BHLHE41Q9C0J9 482 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-208ENST00000494028 XKR8Q9H6D3 395 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 MVB12BQ9H7P6 319 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PRM3Q9NNZ6 103 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SLC6A20Q9NP91 592 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 C8orf4Q9NR00 106 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 UBAP1Q9NZ09 502 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 SCHIP1Q9P0W5 487 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-208ENST00000494028 USP36Q9P275 1121 aaKnown RBP10.21□□□□□ -0.77
CLCN6-208ENST00000494028 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 MOSPD1Q9UJG1 213 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PCDHGB4Q9UN71 923 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 ERVK-11Q9UQG0 969 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 NCKAP1Q9Y2A7 1128 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 GPSM3Q9Y4H4 160 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 PCDHGB5Q9Y5G0 923 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 GMEB1Q9Y692 573 aa10.21□□□□□ -0.77
CLCN6-208ENST00000494028 DPPA5A6NC42 116 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 GABRR3A8MPY1 467 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 VGLL3A8MV65 326 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 H0Y8X5 98 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PDLIM1O00151 329 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 CLIC1O00299 241 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 UPK1AO00322 258 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 EI24O14681 340 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 MAP3K13O43283 966 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PRICKLE3O43900 615 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 CPSF4O95639 269 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 GBAP04062 536 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ASGR2P07307 311 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 IL3P08700 152 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 LINGO3P0C6S8 592 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ACADMP11310 421 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ENGP17813 658 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 GPX2P18283 190 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 IL1RNP18510 177 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 HNRNPA2B1P22626 353 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 TPP2P29144 1249 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ACSL1P33121 698 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 RPL3P39023 403 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 MYBPC1Q00872 1141 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 MDC1Q14676 2089 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 RBBP5Q15291 538 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 RPE65Q16518 533 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PRSS53Q2L4Q9 553 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 FBXO43Q4G163 708 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 FAM98BQ52LJ0 330 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 CPTPQ5TA50 214 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ANXA8L1Q5VT79 327 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 KHDRBS2Q5VWX1 349 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 Q6ZS52 159 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ZBTB49Q6ZSB9 765 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 MMP21Q8N119 569 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 OR4K1Q8NGD4 311 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 OR4A15Q8NGL6 344 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ZFP90Q8TF47 636 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 SNX19Q92543 992 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PPCDCQ96CD2 204 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 RNF145Q96MT1 663 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 WDR92Q96MX6 357 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 CHID1Q9BWS9 393 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 SPATA9Q9BWV2 254 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ANKRD60Q9BZ19 345 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 TRIM4Q9C037 500 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PITHD1Q9GZP4 211 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 MAGIXQ9H6Y5 334 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF696Q9H7X3 374 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 DCAF13Q9NV06 445 aaKnown RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PDP2Q9P2J9 529 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF282Q9UDV7 671 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-208ENST00000494028 ADGRE2Q9UHX3 823 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 UTS2RQ9UKP6 389 aa10.2□□□□□ -0.78
CLCN6-208ENST00000494028 PRAMEF33A0A0G2JMD5 474 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 TRBC2A0A5B9 178 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 FEZF1A0PJY2 475 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 A6NCN8 305 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 EVPLLA8MZ36 301 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PLOD2O00469 737 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms