RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FAM49AQ9H0Q0 323 aaPredicted RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 HSD3B7Q9H2F3 369 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 ZDHHC6Q9H6R6 413 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 PPANQ9NQ55 473 aaKnown RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 TMOD3Q9NYL9 352 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 OR6C2Q9NZP2 312 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 COLEC10Q9Y6Z7 277 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 DCAF1Q9Y4B6 1507 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 SLC15A5A6NIM6 579 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 M0R296 226 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 EPHB6O15197 1021 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 KRT33AO76009 404 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 SNHG28P0DPA3 235 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
SMC2-205ENST00000493955 PAX1P15863 534 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 EVCP57679 992 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 P2RY6Q15077 328 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 MFSD7Q6UXD7 560 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 C1orf186Q6ZWK4 172 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 COX8CQ7Z4L0 72 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 PIGZQ86VD9 579 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 KIRREL3Q8IZU9 778 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 SLC37A3Q8NCC5 494 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 TAF4BQ92750 862 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 FAM111AQ96PZ2 611 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 LRRC2Q9BYS8 371 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 CARD9Q9H257 536 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 DPEP2Q9H4A9 486 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 CCPG1Q9ULG6 757 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 NCKAP1Q9Y2A7 1128 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 ARID2Q68CP9 1835 aa5.52□□□□□ -1.53
SMC2-205ENST00000493955 MAGEB2O15479 319 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 TXNL1O43396 289 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 CLN5O75503 358 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 AREGP15514 252 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 SFNP31947 248 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 TRIM29Q14134 588 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 GAMTQ14353 236 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 EXT1Q16394 746 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 DNAJC21Q5F1R6 531 aaKnown RBP5.51□□□□□ -1.53
SMC2-205ENST00000493955 OR4C11Q6IEV9 310 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 NEK5Q6P3R8 708 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 SLC24A5Q71RS6 500 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 ZNF444Q8N0Y2 327 aaPredicted RBP5.51□□□□□ -1.53
SMC2-205ENST00000493955 CIARTQ8N365 385 aaPredicted RBP5.51□□□□□ -1.53
SMC2-205ENST00000493955 TEX9Q8N6V9 391 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 CCNYQ8ND76 341 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 CNNM3Q8NE01 707 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 KLHDC9Q8NEP7 349 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 FCAMRQ8WWV6 532 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 TM9SF4Q92544 642 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 DDX47Q9H0S4 455 aaKnown RBP5.51□□□□□ -1.53
SMC2-205ENST00000493955 THAP2Q9H0W7 228 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 KCNMB3Q9NPA1 279 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 ZFP57Q9NU63 452 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 TBC1D13Q9NVG8 400 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.51□□□□□ -1.53
SMC2-205ENST00000493955 ACTR3BQ9P1U1 418 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 PILRBQ9UKJ0 227 aa5.51□□□□□ -1.53
SMC2-205ENST00000493955 CCDC162PA2VCL2 907 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SLC28A1O00337 649 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 ACOT8O14734 319 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 BUB3O43684 328 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 KIF5CO60282 957 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 CIDEAO60543 219 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 CAVIN2O95810 425 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 EDN1P05305 212 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 MMP10P09238 476 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 CCNA2P20248 432 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 ITGA3P26006 1051 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 HUNKP57058 714 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SRP54P61011 504 aaKnown RBP5.5□□□□□ -1.53
SMC2-205ENST00000493955 CDR2Q01850 454 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 PPP1R8Q12972 351 aaKnown RBP5.5□□□□□ -1.53
SMC2-205ENST00000493955 GK2Q14410 553 aaPredicted RBP5.5□□□□□ -1.53
SMC2-205ENST00000493955 WBP2NLQ6ICG8 309 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 GDPD4Q6W3E5 623 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 RBMS3Q6XE24 437 aaKnown RBP5.5□□□□□ -1.53
SMC2-205ENST00000493955 KDM8Q8N371 416 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 RFLNBQ8N5W9 214 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 OR4C3Q8NH37 302 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SEPT8Q92599 483 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 HAS2Q92819 552 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 TMEM186Q96B77 213 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SLCO4A1Q96BD0 722 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 MARK4Q96L34 752 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SIX2Q9NPC8 291 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 PANK4Q9NVE7 773 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMC2-205ENST00000493955 EPS15L1Q9UBC2 864 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 SPASTQ9UBP0 616 aa5.5□□□□□ -1.53
SMC2-205ENST00000493955 A0A1B0GUV1 79 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 MTMR11A4FU01 709 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 ARHGAP42A6NI28 874 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 SNURFLB1AK76 121 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 PSMD3O43242 534 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 ATP6V1G1O75348 118 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 CRYAAP02489 173 aa5.49□□□□□ -1.53
SMC2-205ENST00000493955 GPIP06744 558 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms