RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 AZIN1O14977 448 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 AOC2O75106 756 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MPC2O95563 127 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 AP2A1O95782 977 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CST3P01034 146 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 C9P02748 559 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ITGB1P05556 798 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 LTA4HP09960 611 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SFTPCP11686 197 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CPB1P15086 417 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CD19P15391 556 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 LHCGRP22888 699 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PSMB4P28070 264 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ALDH9A1P49189 494 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CLCN4P51793 760 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 GTF2A2P52657 109 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 AIF1P55008 147 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CREMQ03060 361 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DSC1Q08554 894 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 TP53BP2Q13625 1128 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SF3A2Q15428 464 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DPYSL2Q16555 572 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 LGALSLQ3ZCW2 172 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 UNC50Q53HI1 259 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 XKR9Q5GH70 373 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF678Q5SXM1 525 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CPZQ66K79 652 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 XRRA1Q6P2D8 792 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ERICH5Q6P6B1 374 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 METAP1DQ6UB28 335 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 C5orf46Q6UWT4 87 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DLEU7Q6UYE1 221 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 RASSF6Q6ZTQ3 369 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ADGRD2Q7Z7M1 963 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PDZD3Q86UT5 571 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CNTN4Q8IWV2 1026 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SPATA6LQ8N4H0 392 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DNAJC22Q8N4W6 341 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MS4A15Q8N5U1 240 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM86B1Q8N7N1 296 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 EFHBQ8N7U6 833 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 OR2T12Q8NG77 320 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 OR5B17Q8NGF7 314 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 OR6S1Q8NH40 331 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SETD7Q8WTS6 366 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 APH1BQ8WW43 257 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 BSNDQ8WZ55 320 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 HGDQ93099 445 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 NXPE2Q96DL1 559 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 C11orf24Q96F05 449 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 P2RY11Q96G91 374 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DIRAS2Q96HU8 199 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 GMCL1Q96IK5 515 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MSLNLQ96KJ4 702 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 TTPALQ9BTX7 342 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CNPPD1Q9BV87 410 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SNRNP25Q9BV90 132 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 KATNAL1Q9BW62 490 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MND1Q9BWT6 205 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 LGR4Q9BXB1 951 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 BARHL1Q9BZE3 327 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 XYLT2Q9H1B5 865 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 TTYH1Q9H313 450 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PRDM12Q9H4Q4 367 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ZCCHC4Q9H5U6 513 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ESRP2Q9H6T0 727 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 GSN-AS1Q9NRJ2 163 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DCAF13Q9NV06 445 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 AIG1Q9NVV5 245 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MIOSQ9NXC5 875 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DNAJB12Q9NXW2 375 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SLAMF8Q9P0V8 285 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 HECAQ9UBI9 543 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 MLXQ9UH92 298 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PURGQ9UJV8 347 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SPATA2Q9UM82 520 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 EDARQ9UNE0 448 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 NCKAP1Q9Y2A7 1128 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDHGA9Q9Y5G4 932 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CDH10Q9Y6N8 788 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A1B0GVI7 797 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 UBA6A0AVT1 1052 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 ASB14A6NK59 587 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 C9JVG2 144 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 F5H423 210 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CBX4O00257 560 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 WRBO00258 174 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CXCR6O00574 342 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PIP5K1BO14986 540 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 DHX15O43143 795 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 LYRM1O43325 122 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 CHP2O43745 196 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDHGA12O60330 932 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 PLOD3O60568 738 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 SELENOFO60613 162 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 EIF1BO60739 113 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 OR4F21O95013 312 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 GLAP06280 429 aa4.6□□□□□ -1.67
SNRNP40-206ENST00000489853 FHP07954 510 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms