RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OR2AG1Q9H205 316 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TM9SF3Q9HD45 589 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.4□□□□□ -0.74
VPS52-217ENST00000478934 INIPQ9NRY2 104 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 KRT84Q9NSB2 600 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SACM1LQ9NTJ5 587 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SLC6A14Q9UN76 642 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PCDHB11Q9Y5F2 797 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 DENND4CQ5VZ89 1909 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SLC5A10A0PJK1 596 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 C1orf226A1L170 272 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PRAMEF25A6NGN4 478 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 WASH3PC4AMC7 463 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SLC16A5O15375 505 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PCDHGA12O60330 932 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ELFN1P0C7U0 828 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ZNF12P17014 697 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ITIH1P19827 911 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 MAGP20916 626 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 C21orf33P30042 268 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 RYKP34925 604 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CRATP43155 626 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 GABARAPL2P60520 117 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 HBA1P69905 142 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SLC35A2P78381 396 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 KCNJ10P78508 379 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SRSF11Q05519 484 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 EPS8Q12929 822 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CLCA4Q14CN2 919 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 RGNQ15493 299 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SOWAHCQ53LP3 525 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 PRSS36Q5K4E3 855 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CBLL1Q75N03 491 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ARMCX6Q7L4S7 300 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 GRASPQ7Z6J2 395 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 LSRQ86X29 649 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 ANKRD13BQ86YJ7 626 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SYNPOQ8N3V7 929 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TRAM1L1Q8N609 369 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PSD4Q8NDX1 1056 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PROX1Q92786 737 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 C7orf34Q96L11 122 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ALPK1Q96QP1 1244 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ACAT2Q9BWD1 397 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 MIR1-1HGQ9H1L0 117 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 RNF167Q9H6Y7 350 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TBCCD1Q9NVR7 557 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 IL36AQ9UHA7 158 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 RUVBL1Q9Y265 456 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 EYSQ5T1H1 3165 aa10.4□□□□□ -0.75
VPS52-217ENST00000478934 MGAT4DA6NG13 374 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CLDN25C9JDP6 229 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 J3KTA2 159 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 EIF3FO00303 357 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 SPINT1O43278 529 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 KLHL18O94889 574 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 C6orf47O95873 294 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ADH1AP07327 375 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CLTBP09497 229 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CYP2A6P11509 494 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 BMP4P12644 408 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 POU2F1P14859 743 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 EPCAMP16422 314 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ZNF8P17098 575 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 CDH3P22223 829 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 RRM2P31350 389 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 DNAJA1P31689 397 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 CD97P48960 835 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 TBPL1P62380 186 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CYP4F2P78329 520 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 RPP38P78345 283 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 CSTF3Q12996 717 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 COL9A2Q14055 689 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 INAQ16352 499 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 MPEG1Q2M385 716 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ZNF284Q2VY69 593 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 GRHL2Q6ISB3 625 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 SLCO4C1Q6ZQN7 724 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 UTS2BQ765I0 119 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 EIF3MQ7L2H7 374 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 FAM124AQ86V42 546 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CACUL1Q86Y37 369 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 OR4A15Q8NGL6 344 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 FBLIM1Q8WUP2 373 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CHTF18Q8WVB6 975 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ITFG2Q969R8 447 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CHST8Q9H2A9 424 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ZBTB20Q9HC78 741 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 KRBA1A5PL33 1030 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 H0YIV9 168 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ATG13O75143 517 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 WBP4O75554 376 aaKnown RBP10.39□□□□□ -0.75
VPS52-217ENST00000478934 SOD1P00441 154 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms