RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LAS2Q8IYD9 372 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 CREB3L4Q8TEY5 395 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 CT55Q8WUE5 264 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 UBE2E3Q969T4 207 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 SLC45A3Q96JT2 553 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 NSUN5Q96P11 429 aaKnown RBP25.48■■□□□ 1.67
CCM2-211ENST00000478582 RHBGQ9H310 441 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 CENPHQ9H3R5 247 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 NOL11Q9H8H0 719 aaKnown RBP25.48■■□□□ 1.67
CCM2-211ENST00000478582 GPN2Q9H9Y4 310 aaPredicted RBP25.48■■□□□ 1.67
CCM2-211ENST00000478582 CROTQ9UKG9 612 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 PCDHGA6Q9Y5G7 932 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 SPAG7O75391 227 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 CAPN1P07384 714 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 SERPINA6P08185 405 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 RAB40ALP0C0E4 278 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 MYZAPP0CAP1 466 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 TCN2P20062 427 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 ITGAXP20702 1163 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 DNAJB13P59910 316 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 NKAIN1Q4KMZ8 207 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 KCT2Q8NC54 265 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 TCP10LQ8TDR4 215 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 MOCOSQ96EN8 888 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 TMEM237Q96Q45 408 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 MACROD1Q9BQ69 325 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 C17orf62Q9BQA9 187 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 GPR87Q9BY21 358 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 STMN4Q9H169 189 aaPredicted RBP25.47■■□□□ 1.67
CCM2-211ENST00000478582 ACTR8Q9H981 624 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 NDOR1Q9UHB4 597 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 CDC14AQ9UNH5 594 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 TSC22D4Q9Y3Q8 395 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 SLC22A7Q9Y694 548 aa25.47■■□□□ 1.67
CCM2-211ENST00000478582 NDUFS4O43181 175 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 CLEC3AO75596 197 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 STATHP02808 62 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 PIM1P11309 404 aaPredicted RBP25.46■■□□□ 1.67
CCM2-211ENST00000478582 DLSTP36957 453 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 NAA20P61599 178 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 CYP4F2P78329 520 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 RGS1Q08116 209 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 LY6DQ14210 128 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 MED27Q6P2C8 311 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 FAM198BQ6UWH4 519 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.46■■□□□ 1.67
CCM2-211ENST00000478582 CCDC63Q8NA47 563 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 RUFY1Q96T51 708 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 SLC6A16Q9GZN6 736 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 OXSMQ9NWU1 459 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 KCND3Q9UK17 655 aa25.46■■□□□ 1.67
CCM2-211ENST00000478582 ATMQ13315 3056 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 ANKDD1BA6NHY2 528 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 FOXS1O43638 330 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 C1QL1O75973 258 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 SUPT7LO94864 414 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 CLDN9O95484 217 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 CCNG1P51959 295 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 CLCQ05315 142 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 C19orf57Q0VDD7 668 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 HYAL2Q12891 473 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 DNASE1L3Q13609 305 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 LINC00303Q3SY05 128 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 HDXQ7Z353 690 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 VN1R5Q7Z5H4 357 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 ARMC2Q8NEN0 867 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 OR52B6Q8NGF0 335 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 PPP4R1Q8TF05 950 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 EXTL1Q92935 676 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 ATP6V1E2Q96A05 226 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 MAGEB10Q96LZ2 347 aaPredicted RBP25.45■■□□□ 1.66
CCM2-211ENST00000478582 FAM111AQ96PZ2 611 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 DRC3Q9H069 523 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 TMBIM4Q9HC24 238 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 SEMA4BQ9NPR2 832 aaPredicted RBP25.45■■□□□ 1.66
CCM2-211ENST00000478582 SLC22A11Q9NSA0 550 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 SLC17A7Q9P2U7 560 aa25.45■■□□□ 1.66
CCM2-211ENST00000478582 MRPS2Q9Y399 296 aaKnown RBP25.45■■□□□ 1.66
CCM2-211ENST00000478582 ZNF891A8MT65 544 aaPredicted RBP25.44■■□□□ 1.66
CCM2-211ENST00000478582 H0YIV9 168 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 OTCP00480 354 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 CD63P08962 238 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 F8A1P23610 371 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 SERPINB1P30740 379 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 CDH13P55290 713 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 TRAF3Q13114 568 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 RPS27LQ71UM5 84 aaKnown RBP25.44■■□□□ 1.66
CCM2-211ENST00000478582 AFAP1L2Q8N4X5 818 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 OR7G3Q8NG95 312 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 ZNF304Q9HCX3 659 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 ADGRE2Q9UHX3 823 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 RNF11Q9Y3C5 154 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 PCDHGA11Q9Y5H2 935 aa25.44■■□□□ 1.66
CCM2-211ENST00000478582 URADA6NGE7 173 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 GOLGA6L10A6NI86 522 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 C9J4A7 227 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 AGPSO00116 658 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 PRPF4O43172 522 aaKnown RBP eCLIP25.43■■□□□ 1.661e-6■■□□□ 13.8
CCM2-211ENST00000478582 SERPIND1P05546 499 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 RPS15P62841 145 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms