RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 CYP20A1Q6UW02 462 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 IKBIPQ70UQ0 350 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 MIER3Q7Z3K6 550 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 ELMOD1Q8N336 334 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 TTC39CQ8N584 583 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 LEMD2Q8NC56 503 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 NCOA7Q8NI08 942 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 EXOC6Q8TAG9 804 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 MMABQ96EY8 250 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 TMEM68Q96MH6 324 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 RIT2Q99578 217 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 P2RY13Q9BPV8 354 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 TRIM4Q9C037 500 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 UPF2Q9HAU5 1272 aaKnown RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 XPNPEP1Q9NQW7 623 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 GKN1Q9NS71 199 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 BARHL2Q9NY43 387 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 CNOT8Q9UFF9 292 aaKnown RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 CORO1CQ9ULV4 474 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 CCL26Q9Y258 94 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PTPRBP23467 1997 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 NID2Q14112 1375 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PTPRQQ9UMZ3 2332 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 MYH9P35579 1960 aaKnown RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 SHROOM3Q8TF72 1996 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ZCWPW2A0A1B0GU75 182 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 FAM90A26D6RGX4 464 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 PLK4O00444 970 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 SH2B2O14492 632 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 AHCYL1O43865 530 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 EDN1P05305 212 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 OR4Q2P0C623 313 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 PAX1P15863 534 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ALOX12P18054 663 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 CSRP3P50461 194 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 F2RL1P55085 397 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 CEBPZQ03701 1054 aaKnown RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 GAGE5Q13069 117 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 GAGE6Q13070 117 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 FRG1Q14331 258 aaKnown RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 SPDYCQ5MJ68 293 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 TPGS2Q68CL5 300 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 NCEH1Q6PIU2 408 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ZNF704Q6ZNC4 412 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 HACE1Q8IYU2 909 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 PDILTQ8N807 584 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 CCDC89Q8N998 374 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 TMEM116Q8NCL8 245 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 OR10V1Q8NGI7 309 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 SMARCE1Q969G3 411 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 FAM149B1Q96BN6 582 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ZNF524Q96C55 264 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 CEP170P1Q96L14 293 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 WDFY2Q96P53 400 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 F2RL3Q96RI0 385 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 JPH2Q9BR39 696 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 STRA6Q9BX79 667 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 TEKT3Q9BXF9 490 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 PDZD7Q9H5P4 517 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 MARCH4Q9P2E8 410 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 OR14J1Q9UGF5 321 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 POLG2Q9UHN1 485 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 MMP17Q9ULZ9 603 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 LYVE1Q9Y5Y7 322 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ATG2BQ96BY7 2078 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 NOTCH2Q04721 2471 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 SPTAN1Q13813 2472 aaKnown RBP4.37□□□□□ -1.71
PRKD3-208ENST00000475912 KIAA1549LQ6ZVL6 1849 aa4.37□□□□□ -1.71
PRKD3-208ENST00000475912 ADAMTS9Q9P2N4 1935 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 ABCA12Q86UK0 2595 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 A0A1W2PQF6 199 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 CCDC69A6NI79 296 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 K7EQS6 105 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 SGK1O00141 431 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 ANKRD28O15084 1053 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 TRAPPC3O43617 180 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 SYNGR3O43761 229 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 PAGE4O60829 102 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 EIF2S1P05198 315 aaKnown RBP4.36□□□□□ -1.71
PRKD3-208ENST00000475912 GABRR2P28476 465 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 DCTP40126 519 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 CLDN6P56747 220 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 PSMC5P62195 406 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 SEMG2Q02383 582 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 ZNF33AQ06730 810 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
PRKD3-208ENST00000475912 CUL4AQ13619 759 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 MYLK3Q32MK0 819 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 KRTCAP3Q53RY4 240 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 TAF1BQ53T94 588 aaPredicted RBP4.36□□□□□ -1.71
PRKD3-208ENST00000475912 CCNYL2Q5T2Q4 361 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 PAPD4Q6PIY7 484 aaKnown RBP4.36□□□□□ -1.71
PRKD3-208ENST00000475912 CEACAM20Q6UY09 585 aa4.36□□□□□ -1.71
PRKD3-208ENST00000475912 WDTC1Q8N5D0 677 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms