RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 A0A0B4J293 547 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 LINC00854A0A1B0GVQ3 168 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 NPIPB8E9PQR5 432 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 POLR1CO15160 346 aaPredicted RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 SCN2BO60939 215 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 CHMP24386 653 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 GZMKP49863 264 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 IQCF2Q8IXL9 164 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 BHMTQ93088 406 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 RNF31Q96EP0 1072 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 TRAF4Q9BUZ4 470 aaPredicted RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 BEX2Q9BXY8 128 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 C11orf54Q9H0W9 315 aaPredicted RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 RDH14Q9HBH5 336 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 HHATLQ9HCP6 504 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 RLIMQ9NVW2 624 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 FLRT1Q9NZU1 646 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 NDUFAF4Q9P032 175 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 C12orf71A8MTZ7 269 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 TMEM229AB2RXF0 380 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 GPR39O43194 453 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 TRIM3O75382 744 aaPredicted RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 STK16O75716 305 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 RPS3P23396 243 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCM2-207ENST00000475551 RHAGQ02094 409 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 PRKCZQ05513 592 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 SRSF11Q05519 484 aaKnown RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 RUNX1T1Q06455 604 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 PLAG1Q6DJT9 500 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 CERS6Q6ZMG9 384 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 ZNF767PQ75MW2 155 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 WDR36Q8NI36 951 aaKnown RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 BTN2A2Q8WVV5 523 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 SOCS4Q8WXH5 440 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 NIPSNAP1Q9BPW8 284 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 MAGEH1Q9H213 219 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 EXOSC4Q9NPD3 245 aaKnown RBP17.1■□□□□ 0.33
CCM2-207ENST00000475551 PRELID1Q9Y255 219 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 RAI2Q9Y5P3 530 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 TTC3P53804 2025 aa17.1■□□□□ 0.33
CCM2-207ENST00000475551 CENPFP49454 3210 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 TSPAN3O60637 253 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 TBX18O95935 607 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 PRPS1L1P21108 318 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 PSEN2P49810 448 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 WNT3P56703 355 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 DOC2BQ14184 412 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 MICAQ29983 383 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 GDPD1Q8N9F7 314 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 GPR152Q8TDT2 470 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 ADGRE3Q9BY15 652 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 WBP1LQ9NX94 342 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 KCNN3Q9UGI6 736 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 ZNF670-ZNF695F2Z2N8 137 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 H3BM21 787 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 SHOXO15266 292 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 MPZL2O60487 215 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 CSF3P09919 207 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 PIPP12273 146 aaPredicted RBP17.09■□□□□ 0.33
CCM2-207ENST00000475551 ZNF7P17097 686 aaPredicted RBP17.09■□□□□ 0.33
CCM2-207ENST00000475551 CPN2P22792 545 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 FLT3LGP49771 235 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 APIPQ96GX9 242 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 ZNF717Q9BY31 904 aaPredicted RBP17.09■□□□□ 0.33
CCM2-207ENST00000475551 RACGAP1Q9H0H5 632 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 CHST8Q9H2A9 424 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 SEC14L4Q9UDX3 406 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 PCDHGC4Q9Y5F7 938 aa17.09■□□□□ 0.33
CCM2-207ENST00000475551 B8ZZF3 427 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 FKTNO75072 461 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 IGLV3-27P01718 113 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 UBL4AP11441 157 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 EPORP19235 508 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 CDC42P60953 191 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 DAB2P98082 770 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 GGTA1PQ4G0N0 100 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 FAM131AQ6UXB0 335 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 TRIM69Q86WT6 500 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 MIB1Q86YT6 1006 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 LGI4Q8N135 537 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 OR7D4Q8NG98 312 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 LKAAEAR1Q8TD35 194 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 UBASH3BQ8TF42 649 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 DEDD2Q8WXF8 326 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 TINF2Q9BSI4 451 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 SNTG1Q9NSN8 517 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 MAPRE3Q9UPY8 281 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 PCDHB11Q9Y5F2 797 aa17.08■□□□□ 0.33
CCM2-207ENST00000475551 A0A1W2PQ72 361 aa17.08■□□□□ 0.32
CCM2-207ENST00000475551 PRMT3O60678 531 aa17.08■□□□□ 0.32
CCM2-207ENST00000475551 C1QBP02746 253 aa17.08■□□□□ 0.32
CCM2-207ENST00000475551 F11P03951 625 aa17.08■□□□□ 0.32
CCM2-207ENST00000475551 AMD1P17707 334 aa17.08■□□□□ 0.32
CCM2-207ENST00000475551 ITGB7P26010 798 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms