RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 TLR8Q9NR97 1041 aaKnown RBP13.44□□□□□ -0.26
TGFBR3-204ENST00000465892 MCUBQ9NWR8 336 aa13.44□□□□□ -0.26
TGFBR3-204ENST00000465892 CMAHPQ9Y471 501 aa13.44□□□□□ -0.26
TGFBR3-204ENST00000465892 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
TGFBR3-204ENST00000465892 GBF1Q92538 1859 aa13.44□□□□□ -0.26
TGFBR3-204ENST00000465892 A0A075B6Q4 140 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CIB4A0PJX0 185 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 PCDH17O14917 1159 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 SLC25A14O95258 325 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 SRCP12931 536 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CTPS1P17812 591 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 RPS12P25398 132 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 HTR7P34969 479 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 MAPK12P53778 367 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CDH18Q13634 790 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 PTGES3Q15185 160 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.261e-6■■□□□ 12.7
TGFBR3-204ENST00000465892 DGKKQ5KSL6 1271 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TMIGD1Q6UXZ0 262 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TRIM46Q7Z4K8 759 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 GPR65Q8IYL9 337 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ATP6V1C2Q8NEY4 427 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 C1orf74Q96LT6 269 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 C3orf14Q9HBI5 128 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 C11orf16Q9NQ32 467 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 NDUFAF4Q9P032 175 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TLR6Q9Y2C9 796 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 DHRS7Q9Y394 339 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 PRSS21Q9Y6M0 314 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TNFRSF10BO14763 440 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 IGFBP1P08833 259 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 HOXB9P17482 250 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 GABRB1P18505 474 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 MAN2A2P49641 1150 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 DDX39BQ13838 428 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 LEXMQ3ZCV2 418 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CCDC149Q6ZUS6 474 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ZNF367Q7RTV3 350 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 RNF130Q86XS8 419 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 RAD9AQ99638 391 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 DNAJC27Q9NZQ0 273 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 FZD4Q9ULV1 537 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 MAN2B2Q9Y2E5 1009 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 B8ZZF3 427 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 EPOP01588 193 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 ODC1P11926 461 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TWF1Q12792 350 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 GPR19Q15760 415 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 MFSD14CQ5VZR4 134 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 LAMTOR1Q6IAA8 161 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 RDH10Q8IZV5 341 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 OR9Q1Q8NGQ5 310 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 SKA2Q8WVK7 121 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 SH3KBP1Q96B97 665 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CINPQ9BW66 212 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 FAM126AQ9BYI3 521 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 CRISPLD1Q9H336 500 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 TPT1P8Q9HAU6 139 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 C12orf4Q9NQ89 552 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 UCKL1Q9NWZ5 548 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 NDRG2Q9UN36 371 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 YARS2Q9Y2Z4 477 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-204ENST00000465892 DOCK4Q8N1I0 1966 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 RRN3P2A6NIE6 340 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 HLA-EP13747 358 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 ZNF250P15622 560 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 PSMA1P25786 263 aaKnown RBP13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 EVI2BP34910 448 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 CNR2P34972 360 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 UPP1Q16831 310 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 ESCO2Q56NI9 601 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 NELL1Q92832 810 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 REPS1Q96D71 796 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 SLC39A13Q96H72 371 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 EPYCQ99645 322 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 GALNT9Q9HCQ5 603 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 EVA1BQ9NVM1 165 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 SMIM35A0A1B0GVV1 85 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 PCDH7O60245 1069 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 SOX14O95416 240 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 CLDN9O95484 217 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 COX7A2P14406 83 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 ALAS2P22557 587 aa13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■□□ 17.3
TGFBR3-204ENST00000465892 MLLT3P42568 568 aaPredicted RBP13.42□□□□□ -0.26
TGFBR3-204ENST00000465892 SEMG2Q02383 582 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms