RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ANGPTL8Q6UXH0 198 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 FAM83HQ6ZRV2 1179 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 CAMKMTQ7Z624 323 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 HORMAD1Q86X24 394 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 FBLIM1Q8WUP2 373 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 TBC1D20Q96BZ9 403 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 HSPBAP1Q96EW2 488 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 CCDC90BQ9GZT6 254 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 ATG2BQ96BY7 2078 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 SZT2Q5T011 3432 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 LINC01553A4QN01 128 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 INMTO95050 263 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PAPLNO95428 1278 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PRNPP04156 253 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 HNRNPA1P09651 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 ADRB3P13945 408 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PCMT1P22061 227 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 DNAJA1P31689 397 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 LBX1P52954 281 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 MVDP53602 400 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 GABARAPL2P60520 117 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 RFX4Q33E94 735 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 OR9A1PQ8NGU1 263 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 B4GALNT2Q8NHY0 566 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 TBC1D15Q8TC07 691 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 UBE2FQ969M7 185 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 CNDP2Q96KP4 475 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 C7orf34Q96L11 122 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 TRIT1Q9H3H1 467 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 EPHX3Q9H6B9 360 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PREBQ9HCU5 417 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 ACSL6Q9UKU0 697 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 SLC27A6Q9Y2P4 619 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 TMEM98Q9Y2Y6 226 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 TRANK1O15050 2925 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 HOXC11O43248 304 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 LZTS3O60299 673 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 POP7O75817 140 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 ANGPTL1O95841 491 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 C6orf47O95873 294 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 FPR1P21462 350 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 ITGB7P26010 798 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 HPCAL1P37235 193 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 VASPP50552 380 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 VEZF1Q14119 521 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 SMN1Q16637 294 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 TSEN54Q7Z6J9 526 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 B3GNT8Q7Z7M8 397 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 MMP21Q8N119 569 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 PLA2G15Q8NCC3 412 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 FKBP10Q96AY3 582 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 METTL2AQ96IZ6 378 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 FAM129BQ96TA1 746 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 SORBS1Q9BX66 1292 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 SGPP1Q9BX95 441 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 DMRT3Q9NQL9 472 aa17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 THUMPD1Q9NXG2 353 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-210ENST00000464987 DENND4AQ7Z401 1863 aa17.96■□□□□ 0.46
TSPAN4-210ENST00000464987 GOLGA4Q13439 2230 aaKnown RBP17.96■□□□□ 0.46
TSPAN4-210ENST00000464987 ADH1CP00326 375 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 C1GALT1C1LP0DN25 315 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ETFAP13804 333 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 CCNA2P20248 432 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 TMBIM6P55061 237 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ZNF763Q0D2J5 394 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 HNRNPA1L2Q32P51 320 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 TMC5Q6UXY8 1006 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 CPA6Q8N4T0 437 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 VPS37AQ8NEZ2 397 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 WFIKKN2Q8TEU8 576 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 NODALQ96S42 347 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 TMEM184CQ9NVA4 438 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 FAF1Q9UNN5 650 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 DYRK1BQ9Y463 629 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ZNF451Q9Y4E5 1061 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 DGKBQ9Y6T7 804 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 SOBPA7XYQ1 873 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 HEPACAM2A8MVW5 462 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 COQ9O75208 318 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 HTR1BP28222 390 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 CRATP43155 626 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ARHGDIAP52565 204 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 GP2P55259 537 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 GALNT18Q6P9A2 607 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 KLHL35Q6PF15 583 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 C11orf96Q7Z7L8 435 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 CCDC71Q8IV32 467 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 LAS2Q8IYD9 372 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 FBXO15Q8NCQ5 510 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 OR5AK3PQ8NH89 298 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 STARD8Q92502 1023 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ACAT2Q9BWD1 397 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 FUNDC2Q9BWH2 189 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 ZDHHC5Q9C0B5 715 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 REEP4Q9H6H4 257 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 TRIM39Q9HCM9 518 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 TMEM9Q9P0T7 183 aa17.95■□□□□ 0.46
TSPAN4-210ENST00000464987 BAG5Q9UL15 447 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms