RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 UGT1A8Q9HAW9 530 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 MRPL40Q9NQ50 206 aaKnown RBP6.61□□□□□ -1.35
VPS8-216ENST00000463687 CHRAC1Q9NRG0 131 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 ETAA1Q9NY74 926 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 CRLS1Q9UJA2 301 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 RPS6KA6Q9UK32 745 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 UTP11Q9Y3A2 253 aaKnown RBP6.61□□□□□ -1.35
VPS8-216ENST00000463687 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
VPS8-216ENST00000463687 NYNRINQ9P2P1 1898 aaKnown RBP6.61□□□□□ -1.35
VPS8-216ENST00000463687 NUP205Q92621 2012 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GON4LQ3T8J9 2241 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 FAM237BA0A1B0GVD1 139 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 FAM90A20PA6NIJ5 464 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 LMO7DNF2Z398 122 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GOLGA8MH3BSY2 632 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CCL22O00626 93 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CHUKO15111 745 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 YY2O15391 372 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GRID2O43424 1007 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CBFA2T3O75081 653 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 AVILO75366 819 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 MTX2O75431 263 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 SEC31AO94979 1220 aaKnown RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 CLEC3BP05452 202 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 RALBP11234 206 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CEACAM1P13688 526 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZNF8P17098 575 aaPredicted RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 MSH3P20585 1137 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GGT5P36269 586 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GNPDA1P46926 289 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 LIMS1P48059 325 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 PRAMEP78395 509 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CRADDP78560 199 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 MC1RQ01726 317 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CACNG1Q06432 222 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ILF3Q12906 894 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS8-216ENST00000463687 CALCOCO2Q13137 446 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 C1orf61Q13536 156 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CCNIQ14094 377 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 NUMA1Q14980 2115 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 KCNMB1Q16558 191 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 PTCHD3Q3KNS1 767 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 PYCR3Q53H96 274 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 DNAJC21Q5F1R6 531 aaKnown RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZRANB3Q5FWF4 1079 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GPRC6AQ5T6X5 926 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 KCTD16Q68DU8 428 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CASC4Q6P4E1 433 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 AFTPHQ6ULP2 937 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 MED25Q71SY5 747 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 MARK2Q7KZI7 788 aaKnown RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 TAF8Q7Z7C8 310 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ADGRE4PQ86SQ3 457 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ADGRG6Q86SQ4 1221 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 TAGAPQ8N103 731 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 PDIK1LQ8N165 341 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 EID2Q8N6I1 236 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 DEFB124Q8NES8 71 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 OR4L1Q8NH43 312 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 OR4C6Q8NH72 309 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 NFKBIDQ8NI38 313 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZCCHC10Q8TBK6 192 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS8-216ENST00000463687 DCUN1D1Q96GG9 259 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZNF514Q96K75 400 aaPredicted RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZNF778Q96MU6 729 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 OR2M4Q96R27 311 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 COPS8Q99627 209 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 TRIM51Q9BSJ1 452 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GSDMCQ9BYG8 508 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 TXLNGYQ9BZA5 131 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 TRIM31Q9BZY9 425 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CLPBQ9H078 707 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 RAB17Q9H0T7 212 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 SUDS3Q9H7L9 328 aaPredicted RBP6.6□□□□□ -1.35
VPS8-216ENST00000463687 TREX1Q9NSU2 369 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 SYBUQ9NX95 663 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 NLGN3Q9NZ94 848 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 NCKIPSDQ9NZQ3 722 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ATXN10Q9UBB4 475 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GIMAP2Q9UG22 337 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 SLC2A6Q9UGQ3 507 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ZNHIT2Q9UHR6 403 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 ANAPC5Q9UJX4 755 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 BTBD3Q9Y2F9 522 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 SNX24Q9Y343 169 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 GVINP1Q7Z2Y8 2422 aa6.6□□□□□ -1.35
VPS8-216ENST00000463687 CFAP54Q96N23 3096 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 TRBV5-4A0A0C4DH59 114 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 CCDC162PA2VCL2 907 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 KMOO15229 486 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 DHHO43323 396 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 TNFSF14O43557 240 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 KCNJ13O60928 360 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 CCNDBP1O95273 360 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 KCNK5O95279 499 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 LDOC1O95751 146 aaPredicted RBP6.59□□□□□ -1.35
VPS8-216ENST00000463687 TTC4O95801 387 aa6.59□□□□□ -1.35
VPS8-216ENST00000463687 GOT2P00505 430 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms