RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ZBTB26Q9HCK0 441 aa21.4■■□□□ 1.02
C9orf3-209ENST00000460573 SEMA4BQ9NPR2 832 aaPredicted RBP21.4■■□□□ 1.02
C9orf3-209ENST00000460573 ADGRE2Q9UHX3 823 aa21.4■■□□□ 1.02
C9orf3-209ENST00000460573 TSC22D4Q9Y3Q8 395 aa21.4■■□□□ 1.02
C9orf3-209ENST00000460573 SDK2Q58EX2 2172 aa21.4■■□□□ 1.02
C9orf3-209ENST00000460573 URADA6NGE7 173 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 K7ENP7 123 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 OR7A17O14581 309 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 NDUFS4O43181 175 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 ZWINTO95229 277 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 MLYCDO95822 493 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 SERPINA6P08185 405 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 PIM1P11309 404 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 CD22P20273 847 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 ALAS2P22557 587 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 HPDP32754 393 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 DCDP81605 110 aaKnown RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 FAM53BQ14153 422 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 PRMT9Q6P2P2 845 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 INO80CQ6PI98 192 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 GOLGA6L1Q8N7Z2 621 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 TLCD1Q96CP7 247 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 NSUN5Q96P11 429 aaKnown RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 GBP5Q96PP8 586 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 C17orf62Q9BQA9 187 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 EFHD1Q9BUP0 239 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 DRC3Q9H069 523 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 RHBGQ9H310 441 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 DHCR7Q9UBM7 475 aaKnown RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF490Q9ULM2 529 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-209ENST00000460573 CDC14AQ9UNH5 594 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 PCDHGA11Q9Y5H2 935 aa21.39■■□□□ 1.01
C9orf3-209ENST00000460573 MDC1Q14676 2089 aaKnown RBP21.38■■□□□ 1.01
C9orf3-209ENST00000460573 H0YIV9 168 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 H3BQF6 201 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 P2RX6O15547 441 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 TRIM13O60858 407 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 CLEC3AO75596 197 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ARL1P40616 181 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-209ENST00000460573 STAT5AP42229 794 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ETV4P43268 484 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 PCLAFQ15004 111 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 RBBP7Q16576 425 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 GGTA1PQ4G0N0 100 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF385CQ66K41 422 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-209ENST00000460573 MILR1Q7Z6M3 343 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 MYLK4Q86YV6 388 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-209ENST00000460573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ARHGEF39Q8N4T4 335 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 OR52B6Q8NGF0 335 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 MR1Q95460 341 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ZBTB9Q96C00 473 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ACBD3Q9H3P7 528 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 KCNK9Q9NPC2 374 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 NDOR1Q9UHB4 597 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 SLC22A7Q9Y694 548 aa21.38■■□□□ 1.01
C9orf3-209ENST00000460573 ONECUT2O95948 504 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 SERPIND1P05546 499 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 CD63P08962 238 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 SLC18A1P54219 525 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 NAGLUP54802 743 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 CDH13P55290 713 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 MAGOHP61326 146 aaKnown RBP21.37■■□□□ 1.01
C9orf3-209ENST00000460573 LCP2Q13094 533 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 TRAF3Q13114 568 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 TGIF1Q15583 401 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 CFAP157Q5JU67 520 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 C10orf62Q5T681 223 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-209ENST00000460573 TMEM214Q6NUQ4 689 aaKnown RBP21.37■■□□□ 1.01
C9orf3-209ENST00000460573 NIPAL1Q6NVV3 410 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 C10orf107Q8IVU9 208 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 CCNYL1Q8N7R7 359 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 TRPC4APQ8TEL6 797 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 CREB3L4Q8TEY5 395 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 KIAA1143Q96AT1 154 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-209ENST00000460573 C10orf90Q96M02 699 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF382Q96SR6 550 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 ARHGAP9Q9BRR9 750 aa21.37■■□□□ 1.01
C9orf3-209ENST00000460573 C21orf140B9A014 251 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 PIK3CBP42338 1070 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 PKNOX1P55347 436 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 STXBP1P61764 594 aaKnown RBP21.36■■□□□ 1.01
C9orf3-209ENST00000460573 SKP1P63208 163 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 PHEXP78562 749 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 RPS27LQ71UM5 84 aaKnown RBP21.36■■□□□ 1.01
C9orf3-209ENST00000460573 KCT2Q8NC54 265 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 OR7G3Q8NG95 312 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 SH3GL2Q99962 352 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 SLC6A16Q9GZN6 736 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 GSTO2Q9H4Y5 243 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 TRPS1Q9UHF7 1281 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 SSUH2Q9Y2M2 353 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 RNF11Q9Y3C5 154 aa21.36■■□□□ 1.01
C9orf3-209ENST00000460573 BPGMP07738 259 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 RAB40ALP0C0E4 278 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 TCN2P20062 427 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ALDH3A1P30838 453 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 AVPR1BP47901 424 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 CYP4F2P78329 520 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 HERC3Q15034 1050 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms