RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ERVK-18Q9QC07 812 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 ATP5A1P25705 553 aaKnown RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 PSMA6P60900 246 aaKnown RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 SH3D19Q5HYK7 790 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 FRG2Q64ET8 278 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 GRASPQ7Z6J2 395 aaPredicted RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 TESCQ96BS2 214 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 FRG2BQ96QU4 278 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 FCRL5Q96RD9 977 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 SERINC1Q9NRX5 453 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 FBXL12Q9NXK8 326 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 TMEM5Q9Y2B1 443 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 SLC5A7Q9GZV3 580 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 SSU72Q9NP77 194 aaKnown RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 OR2T5Q6IEZ7 315 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 GLB1L3Q8NCI6 653 aaPredicted RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 OR2T29Q8NH02 315 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 SETD7Q8WTS6 366 aaKnown RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 ASB9Q96DX5 294 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 THUMPD1Q9NXG2 353 aaKnown RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 GJD2Q9UKL4 321 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 KCNS2Q9ULS6 477 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 BHMG1C9JSJ3 638 aaPredicted RBP19.06■□□□□ 0.64
SNX27-204ENST00000458013 ENTPD6O75354 484 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 PRPS1L1P21108 318 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 ZNF565Q8N9K5 539 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 CAPNS2Q96L46 248 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 NUDT15Q9NV35 164 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 LAMP5Q9UJQ1 280 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 POFUT2Q9Y2G5 429 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 POP7O75817 140 aaKnown RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 POLR2CP19387 275 aaPredicted RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 HTR7P34969 479 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 SMSP52788 366 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 SPRYD7Q5W111 196 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 IGDCC3Q8IVU1 814 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 DPAGT1Q9H3H5 408 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 CUEDC1Q9NWM3 386 aaPredicted RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 YIPF1Q9Y548 306 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 TEX13DA0A0J9YY54 714 aaPredicted RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 M0QX08 132 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 CNTN5O94779 1100 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 HAPLN3Q96S86 360 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 NDC1Q9BTX1 674 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 C14orf166Q9Y224 244 aaKnown RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 I3L521 148 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 MAGEA11P43364 429 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 FEZF1A0PJY2 475 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 KCNJ13O60928 360 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 PNLIPRP1P54315 467 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 CDK6Q00534 326 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 HERC3Q15034 1050 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 SPIN4Q56A73 249 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 SPANXN4Q5MJ08 99 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 LRRTM4Q86VH4 590 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 NLGN4XQ8N0W4 816 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 CMTM7Q96FZ5 175 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 TSSK6Q9BXA6 273 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 RNF38Q9H0F5 515 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 FBRSL1Q9HCM7 1045 aaKnown RBP19.05■□□□□ 0.64
SNX27-204ENST00000458013 HIF3AQ9Y2N7 669 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 CREG1O75629 220 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 KCNJ11Q14654 390 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 C14orf119Q9NWQ9 140 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 ROBO1Q9Y6N7 1651 aa19.05■□□□□ 0.64
SNX27-204ENST00000458013 SPARCP09486 303 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 AOC1P19801 751 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 GMPRP36959 345 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 FAM76BQ5HYJ3 339 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 C17orf62Q9BQA9 187 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 ATP6V1G1O75348 118 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 GSK3BP49841 420 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 LASP1Q14847 261 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 MYLK3Q32MK0 819 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 SWT1Q5T5J6 900 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 FAM180BQ6P0A1 224 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 PLD6Q8N2A8 252 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 HDAC2Q92769 488 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 TMEM80Q96HE8 168 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 CCDC86Q9H6F5 360 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 PCDHGB5Q9Y5G0 923 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 INPPL1O15357 1258 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 PTX3P26022 381 aaPredicted RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 CASRP41180 1078 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 XKR5Q6UX68 686 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 BOLLQ8N9W6 283 aaKnown RBP19.04■□□□□ 0.64
SNX27-204ENST00000458013 SUN3Q8TAQ9 357 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 IL21RQ9HBE5 538 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 TNFSF12O43508 249 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 EFR3AQ14156 821 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 SLC25A25Q6KCM7 469 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 THAP6Q8TBB0 222 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 RAB36O95755 333 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 ENTPD1P49961 510 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 TMEM156Q8N614 296 aa19.04■□□□□ 0.64
SNX27-204ENST00000458013 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms