RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 CCM2Q9BSQ5 444 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 ARHGEF33A8MVX0 844 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 FAM227AF5H4B4 570 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 TAF4O00268 1085 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SNPHO15079 494 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 DPM1O60762 260 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 RECKO95980 971 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 GBAP04062 536 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 CDH12P55289 794 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 PRSS53Q2L4Q9 553 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 TPRG1Q6ZUI0 275 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 USP43Q70EL4 1123 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 RASGRP3Q8IV61 690 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 OR4K1Q8NGD4 311 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 POP5Q969H6 163 aaKnown RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SCRN2Q96FV2 425 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 C2orf49Q9BVC5 232 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 PCDHGB3Q9Y5G1 929 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ISPDA4D126 451 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 AOC2O75106 756 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HIST1H2AGP0C0S8 130 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 SRCP12931 536 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HIST1H2ADP20671 130 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 TCEA1P23193 301 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 PCGF2P35227 344 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RGS6P49758 472 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 TUBA1BP68363 451 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ST3GAL4Q11206 333 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ELAVL2Q12926 359 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ABRQ12979 859 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 MLIPQ5VWP3 458 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RETSATQ6NUM9 610 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 NPAS4Q8IUM7 802 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 BBS7Q8IWZ6 715 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 FAM9CQ8IZT9 166 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 LGI4Q8N135 537 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 OR2AP1Q8NGE2 309 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ATL1Q8WXF7 558 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ECHDC3Q96DC8 303 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ASIC4Q96FT7 647 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HIST1H2AHQ96KK5 128 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HIST1H2AJQ99878 128 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 H2AFJQ9BTM1 129 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ROGDIQ9GZN7 287 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ANKHQ9HCJ1 492 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 PCDH17O14917 1159 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 OBSL1O75147 1896 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 OR56A5P0C7T3 313 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ALOX12P18054 663 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 SERPINA4P29622 427 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 HNMTP50135 292 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 SELENOWP63302 87 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ACSM2AQ08AH3 577 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 MPEG1Q2M385 716 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 ACSM2BQ68CK6 577 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 PNCKQ6P2M8 343 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 CCBE1Q6UXH8 406 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 WDR53Q7Z5U6 358 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 DNAJB7Q7Z6W7 309 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 THOC6Q86W42 341 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RAD9AQ99638 391 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RSPO3Q9BXY4 272 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-209ENST00000448770 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 TRIM39Q9HCM9 518 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 RNF186Q9NXI6 227 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 B4GALT6Q9UBX8 382 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 SH2B3Q9UQQ2 575 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 UGT2A1Q9Y4X1 527 aa13.14□□□□□ -0.31
POLR1B-209ENST00000448770 CTDSP2O14595 271 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 AP3D1O14617 1153 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 HAT1O14929 419 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 PRMT3O60678 531 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 ABLIM3O94929 683 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 IGSF6O95976 241 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 C21orf58P58505 322 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 HBA1P69905 142 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 MC1RQ01726 317 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 SPIBQ01892 262 aa13.13□□□□□ -0.31
POLR1B-209ENST00000448770 C10orf62Q5T681 223 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms