RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 KCNK13Q9HB14 408 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 MMP25Q9NPA2 562 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 C14orf105Q9NVL8 296 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TRMT1Q9NXH9 659 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.02□□□□□ -1.93
PMS1-215ENST00000447232 ACSL5Q9ULC5 683 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 PCDHGB3Q9Y5G1 929 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 HEBP2Q9Y5Z4 205 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 NFS1Q9Y697 457 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CADP27708 2225 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 IGHV3-20A0A0C4DH32 117 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 C2CD4BA6NLJ0 364 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CASKO14936 926 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CETN3O15182 167 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 MATN3O15232 486 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 P4HA2O15460 535 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 POLR2DO15514 142 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 SEC24DO94855 1032 aaPredicted RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 HEXBP07686 556 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CRYGSP22914 178 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 VAMP1P23763 118 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 HTR7P34969 479 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TIMP3P35625 211 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 PRKCIP41743 596 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ITGA8P53708 1063 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 RPL26P61254 145 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 APBA1Q02410 837 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 FAM214AQ32MH5 1076 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TCTE1Q5JU00 501 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TRILQ7L0X0 811 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 SLC5A8Q8N695 610 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 LINC00482Q8N8I6 264 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 M1APQ8TC57 530 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CCHCR1Q8TD31 782 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 BRSK1Q8TDC3 778 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 PIK3IP1Q96FE7 263 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ZNF747Q9BV97 191 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 XKR8Q9H6D3 395 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 SPHK1Q9NYA1 384 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CNOT11Q9UKZ1 510 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 RPL26L1Q9UNX3 145 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 A0A0A6YYJ9 748 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 PINLYPA6NC86 204 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 MGAT4DA6NG13 374 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 SLCO1B7G3V0H7 640 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 UBFD1O14562 309 aaKnown RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 SUSD5O60279 629 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 OR10H2O60403 315 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 GLSO94925 669 aaPredicted RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 SLC35G4P0C7Q5 338 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 C8orf89P0DMQ9 161 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 IGHV4-31P0DP07 118 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 TPH1P17752 444 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 SDC4P31431 198 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 HLCSP50747 726 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ACTG1P63261 375 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 GTF2H3Q13889 308 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 PPP2R5EQ16537 467 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ATP13A5Q4VNC0 1218 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 C2CD6Q53TS8 623 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ZC3H12BQ5HYM0 836 aaKnown RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 WLSQ5T9L3 541 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 CYB5R2Q6BCY4 276 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 FAM173BQ6P4H8 233 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 SARM1Q6SZW1 724 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 RGS9BPQ6ZS82 235 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 CPEB2Q7Z5Q1 589 aaKnown RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 HOOK3Q86VS8 718 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ELOA2Q8IYF1 753 aaPredicted RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 AMER3Q8N944 861 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 TTC29Q8NA56 475 aaPredicted RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 OR2L2Q8NH16 312 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 FAM172AQ8WUF8 416 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 RXFP2Q8WXD0 754 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 GCDHQ92947 438 aaPredicted RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 ZBTB8AQ96BR9 441 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 SARAFQ96BY9 339 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 REPS1Q96D71 796 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ART5Q96L15 291 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 USP28Q96RU2 1077 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 SYT3Q9BQG1 590 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 WDR83Q9BRX9 315 aaKnown RBP3.01□□□□□ -1.93
PMS1-215ENST00000447232 DEPPQ9NTK1 212 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 GALNT8Q9NY28 637 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 NTMQ9P121 344 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 FZD10Q9ULW2 581 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ICKQ9UPZ9 632 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 CHKBQ9Y259 395 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 HERC2O95714 4834 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 DOCK7Q96N67 2140 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 IGHV4-30-2A0A087WSY4 118 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 ANKRD34BA5PLL1 514 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 KLHL33A6NCF5 533 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 OR2AG2A6NM03 316 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 C2orf81A6NN90 581 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 DFFAO00273 331 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 EPPINO95925 133 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 IL18BPO95998 194 aa3.01□□□□□ -1.93
PMS1-215ENST00000447232 IGHV4-39P01824 125 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms