RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PTHP01270 115 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 URODP06132 367 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 RETP07949 1114 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 GABARAPL2P60520 117 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 DOC2AQ14183 400 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CLEC12AQ5QGZ9 265 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 C10orf62Q5T681 223 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 NCEH1Q6PIU2 408 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 MRPL10Q7Z7H8 261 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TSPYL5Q86VY4 417 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 THOC6Q86W42 341 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CYB5D2Q8WUJ1 264 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TRIB3Q96RU7 358 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CPPED1Q9BRF8 314 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PLAGL1Q9UM63 463 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 AP3M1Q9Y2T2 418 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ADAMDEC1O15204 470 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PLOD3O60568 738 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CAPNS1P04632 268 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 MANFP55145 182 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ELAVL2Q12926 359 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 GCNT6Q5T4J0 391 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 BBS7Q8IWZ6 715 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CIDECQ96AQ7 238 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 OR5M11Q96RB7 305 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 FAM83DQ9H4H8 585 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 EQTNQ9NQ60 294 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 B4GALT6Q9UBX8 382 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TRBC2A0A5B9 178 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CPNE3O75131 537 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 GABARAPO95166 117 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 LRG1P02750 347 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 BUD31P41223 144 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CRISP3P54108 245 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SLC35A2P78381 396 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 NFE2L1Q14494 772 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 NCF4Q15080 339 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TIMM50Q3ZCQ8 353 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SPATS1Q496A3 300 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ERICH5Q6P6B1 374 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 USP30Q70CQ3 517 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SHFQ7M4L6 423 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 RAB43Q86YS6 212 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PARP16Q8N5Y8 322 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TCEANCQ8N8B7 351 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ADAMTS16Q8TE57 1224 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 EID2BQ96D98 161 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SORBS1Q9BX66 1292 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 ASPNQ9BXN1 380 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 TBC1D17Q9HA65 648 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SIRT5Q9NXA8 310 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PAQR5Q9NXK6 330 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SLC25A13Q9UJS0 675 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 RUVBL1Q9Y265 456 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 A0A1W2PRU2 124 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 PCDH17O14917 1159 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 UPK1BO75841 260 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 CDRT1O95170 752 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 SPNP16150 400 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 JUNBP17275 347 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 GSTM5P46439 218 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 TAS2R50P59544 299 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 SRP54P61011 504 aaKnown RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 AP1S1P61966 158 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 ACVR1Q04771 509 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 MRPL28Q13084 256 aaKnown RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 IQCCQ4KMZ1 466 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 AGTRAPQ6RW13 159 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 TRIM69Q86WT6 500 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 IQCF1Q8N6M8 205 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 RIOK2Q9BVS4 552 aaKnown RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 NLNQ9BYT8 704 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 MMP27Q9H306 513 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 PCDHGA3Q9Y5H0 932 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 PEX16Q9Y5Y5 336 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 NOTOA8MTQ0 251 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 EIF3FO00303 357 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 TLX2O43763 284 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 SSX4O60224 188 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 CCNB2O95067 398 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 IFNW1P05000 195 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 BCHEP06276 602 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-203ENST00000444191 ETV3P41162 512 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 ACLYP53396 1101 aa11.22□□□□□ -0.61
HCFC1-203ENST00000444191 RING1Q06587 406 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms