RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 USP22Q9UPT9 525 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 SAMD4AQ9UPU9 718 aaKnown RBP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 ICKQ9UPZ9 632 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PLXND1Q9Y4D7 1925 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 SAC3D1A6NKF1 404 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 C10orf142B7Z368 130 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CLIC1O00299 241 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 TPST1O60507 370 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 RASAL1O95294 804 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 FUCA1P04066 466 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 LYNP07948 512 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 GPX2P18283 190 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 PSMB5P28074 263 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CMPK1P30085 196 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 ACSL1P33121 698 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 RABIFP47224 123 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CHN2P52757 468 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 ARFIP1P53367 373 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 PRDX1Q06830 199 aaKnown RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 TMEM35AQ53FP2 167 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 KIAA0895LQ68EN5 471 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 TMEM154Q6P9G4 183 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 ENPP7Q6UWV6 458 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 ABRAXAS1Q6UWZ7 409 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 PGBD3Q8N328 593 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 GALNT4Q8N4A0 578 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 OR4A15Q8NGL6 344 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 GOT1L1Q8NHS2 421 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 FAM174AQ8TBP5 190 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 SDCCAG3Q96C92 435 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CIB1Q99828 191 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 TBCDQ9BTW9 1192 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 CHID1Q9BWS9 393 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 COQ10BQ9H8M1 238 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 MIEF1Q9NQG6 463 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 TRNAU1APQ9NX07 287 aaKnown RBP12.62□□□□□ -0.39
CPSF4-206ENST00000441580 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 PCDHGB4Q9UN71 923 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 HS3ST3A1Q9Y663 406 aa12.62□□□□□ -0.39
CPSF4-206ENST00000441580 C1orf226A1L170 272 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 POM121BA6NF01 834 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 GABRR3A8MPY1 467 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 PRAMEF26H0Y7S4 382 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 PLPP1O14494 284 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SH3BGRLO75368 114 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CREG1O75629 220 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SMNDC1O75940 238 aaKnown RBP eCLIP12.61□□□□□ -0.391e-8■■■■■ 30.2
CPSF4-206ENST00000441580 CPSF4O95639 269 aaKnown RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 GSNP06396 782 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ENGP17813 658 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 MAPK12P53778 367 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CLDN2P57739 230 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 TRA2BP62995 288 aaKnown RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CSNK1G2P78368 415 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 PRKCQQ04759 706 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 BIRC2Q13490 618 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 TDGQ13569 410 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CLCA4Q14CN2 919 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 VMACQ2NL98 169 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CCNYL2Q5T2Q4 361 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 DEPDC1Q5TB30 811 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ADCK2Q7Z695 626 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ZZZ3Q8IYH5 903 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 C2orf73Q8N5S3 287 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 LMNTD1Q8N9Z9 388 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF740Q8NDX6 193 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 RGMAQ96B86 450 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SLC22A18Q96BI1 424 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SEPHS2Q99611 448 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SARGQ9BW04 601 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 NEUROD4Q9HD90 331 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 PRDM8Q9NQV8 689 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 DCAF13Q9NV06 445 aaKnown RBP12.61□□□□□ -0.39
CPSF4-206ENST00000441580 TMEM184CQ9NVA4 438 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SH3BP4Q9P0V3 963 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 RPS6KA6Q9UK32 745 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 CROCCQ5TZA2 2017 aa12.61□□□□□ -0.39
CPSF4-206ENST00000441580 SHISA7A6NL88 538 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 OR52A4PA6NMU1 304 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 CLOCKO15516 846 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 OR1F1O43749 312 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 NARSO43776 548 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 GPR37L1O60883 481 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms