RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 RD3Q7Z3Z2 195 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 NET1Q7Z628 596 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 C11orf74Q86VG3 221 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 C17orf64Q86WR6 236 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 ZDHHC13Q8IUH4 622 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 MCATQ8IVS2 390 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 RBM12BQ8IXT5 1001 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 LAS2Q8IYD9 372 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 ULK2Q8IYT8 1036 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 DEFB107AQ8IZN7 70 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 DSELQ8IZU8 1212 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 PGAM4Q8N0Y7 254 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 FBXW8Q8N3Y1 598 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SDR16C5Q8N3Y7 309 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SFRP1Q8N474 314 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 MFSD2AQ8NA29 543 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 PJA1Q8NG27 643 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 TTLQ8NG68 377 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR7G3Q8NG95 312 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 DNAJB8Q8NHS0 232 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 WDR20Q8TBZ3 569 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 LCN9Q8WX39 176 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR1E3Q8WZA6 343 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 STARD8Q92502 1023 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 GATA6Q92908 595 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 NEIL2Q969S2 332 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SLC22A18Q96BI1 424 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 BIRC7Q96CA5 298 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 RCN3Q96D15 328 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 ANAPC16Q96DE5 110 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 CXorf40BQ96DE9 158 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SPDL1Q96EA4 605 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 MARK4Q96L34 752 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 C12orf66Q96MD2 445 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 QRFPRQ96P65 431 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR4K3Q96R72 315 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 MYOCQ99972 504 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 AIF1LQ9BQI0 150 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 THTPAQ9BU02 230 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 FOXQ1Q9C009 403 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 RHBGQ9H310 441 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 C6orf106Q9H6K1 298 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 WDR41Q9HAD4 459 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 FZD3Q9NPG1 666 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 PRDM8Q9NQV8 689 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 IMP3Q9NV31 184 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SPATA6Q9NWH7 488 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SIRT5Q9NXA8 310 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 CCDC167Q9P0B6 97 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 VPS29Q9UBQ0 182 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 ADAM30Q9UKF2 790 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 CROTQ9UKG9 612 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SNX7Q9UNH6 387 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 KCNK6Q9Y257 313 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 RUVBL1Q9Y265 456 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 AP3M1Q9Y2T2 418 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 WBP11Q9Y2W2 641 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 CCL27Q9Y4X3 112 aa3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 TDRD6O60522 2096 aaKnown RBP3.82□□□□□ -1.8
HMGB1P37-201ENST00000439613 SPAG17Q6Q759 2223 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CACNA1IQ9P0X4 2223 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 A0A088AWK7 358 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 C15orf38-AP3S2A0A0A6YYH1 394 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 TRBC2A0A5B9 178 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PIPSLA2A3N6 862 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ANKDD1BA6NHY2 528 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CCDC154A6NI56 674 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 SLC22A31A6NKX4 558 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 MEI4A8MW99 385 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 TLR4O00206 839 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 NR5A2O00482 541 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 MRASO14807 208 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 EEDO75530 441 aaKnown RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 SLITRK5O94991 958 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 SEMA3DO95025 777 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 STAMBPO95630 424 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 VIPP01282 170 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 G6PDP11413 515 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PCNAP12004 261 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 BCKDHAP12694 445 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CDH1P12830 882 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 F3P13726 295 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CTSEP14091 401 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ITGAXP20702 1163 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PRPS1L1P21108 318 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ME2P23368 584 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CD38P28907 300 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CMPK1P30085 196 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PKLRP30613 574 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 RPL3P39023 403 aaKnown RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ACTR1BP42025 376 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 GSTM5P46439 218 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 HTR6P50406 440 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 NEK2P51955 445 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ARFIP1P53367 373 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms