RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TNPO3Q9Y5L0 923 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 J3KTA2 159 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 TOXO94900 526 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 STATHP02808 62 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 FCER2P06734 321 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 FGF4P08620 206 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 TSPAN19P0C672 248 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 COX7A2P14406 83 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 SOX6P35712 828 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 PIK3CBP42338 1070 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 MEF2AQ02078 507 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 RUNX1T1Q06455 604 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 CHIT1Q13231 466 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 TUBA3CQ13748 450 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 LEXMQ3ZCV2 418 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 IER5LQ5T953 404 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR2T5Q6IEZ7 315 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 NCEH1Q6PIU2 408 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 SUSD1Q6UWL2 747 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 DPY19L3Q6ZPD9 716 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR2T29Q8NH02 315 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 PPP3R2Q96LZ3 170 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF558Q96NG5 402 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 FEVQ99581 238 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ITPAQ9BY32 194 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 PDFQ9HBH1 243 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 AASDHPPTQ9NRN7 309 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 MBD1Q9UIS9 605 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ATG2BQ96BY7 2078 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR7A17O14581 309 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 KMOO15229 486 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 GABARAPO95166 117 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 IGFBP1P08833 259 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CLEC2LP0C7M8 214 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PRKCAP17252 672 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 IL12RB1P42701 662 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PTPN5P54829 565 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PPP2R2BQ00005 443 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 BTBD16Q32M84 506 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF691Q5VV52 312 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ASB18Q6ZVZ8 466 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF675Q8TD23 568 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ITPKCQ96DU7 683 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 VPS35Q96QK1 796 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 C1orf109Q9NX04 203 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 MS4A12Q9NXJ0 267 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 MUTYHQ9UIF7 546 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 MRPS7Q9Y2R9 242 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 URB1O60287 2271 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PLK4O00444 970 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 GFRA2O00451 464 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TULP3O75386 442 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CRYZL1O95825 349 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TSPAN12O95859 305 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 RPLP2P05387 115 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 HMGA1P17096 107 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ENGP17813 658 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPAM1P38567 509 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC19A1P41440 591 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CBLBQ13191 982 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CAMK2BQ13554 666 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 AMIGO1Q86WK6 493 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TMEM25Q86YD3 366 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 LILRA3Q8N6C8 439 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 COQ8BQ96D53 544 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 UCK2Q9BZX2 261 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACTL8Q9H568 366 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 NUDT4Q9NZJ9 180 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 MYOFQ9NZM1 2061 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 A0A1W2PQ09 198 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CCDC182A6NF36 153 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TEX28O15482 410 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PDYNP01213 254 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 NTHL1P78549 312 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 DEFB103AP81534 67 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CAMK2GQ13555 558 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 IRF3Q14653 427 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TYSND1Q2T9J0 566 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 LIPKQ5VXJ0 399 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 PLPP4Q5VZY2 271 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 CDH24Q86UP0 819 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 NATD1Q8N6N6 113 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 TMEFF2Q9UIK5 374 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 DOCK6Q96HP0 2047 aa9.59□□□□□ -0.87
CDC42SE1-202ENST00000439374 ARHGEF9O43307 516 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 HOXA2O43364 376 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CLDN9O95484 217 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CXCL14O95715 111 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 BCKDHAP12694 445 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PCMT1P22061 227 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CD6P30203 668 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 HMGCLP35914 325 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 E2F2Q14209 437 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF284Q2VY69 593 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PAQR6Q6TCH4 344 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 HACD2Q6Y1H2 254 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms