RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 AP2M1Q96CW1 435 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CDKN2AIPNLQ96HQ2 116 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CDHR1Q96JP9 859 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF354BQ96LW1 612 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 EGLN3Q9H6Z9 239 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 UPF2Q9HAU5 1272 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF334Q9HCZ1 680 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RAB9BQ9NP90 201 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 INTS9Q9NV88 658 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 HMG20BQ9P0W2 317 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 IL19Q9UHD0 177 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 FBXL4Q9UKA2 621 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 FBXW2Q9UKT8 454 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RUVBL2Q9Y230 463 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 BCORL1Q5H9F3 1711 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 MADDQ8WXG6 1647 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP10AO60312 1499 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 NCOA1Q15788 1441 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 EME2A4GXA9 379 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SRRM4A7MD48 611 aaKnown RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 FPGTO14772 594 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 KLF11O14901 512 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 FGF17O60258 216 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SEC22BO75396 215 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 BCAS2O75934 225 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 AP2A2O94973 939 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 LETM1O95202 739 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 NGFP01138 241 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CRYAAP02489 173 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 HMOX1P09601 288 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 TYMPP19971 482 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 LHCGRP22888 699 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SSTR1P30872 391 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SRD5A2P31213 254 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CTNNB1P35222 781 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SFTPDP35247 375 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CBX3Q13185 183 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 RBM39Q14498 530 aaKnown RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF718Q3SXZ3 478 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC35E4Q6ICL7 350 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 RAB12Q6IQ22 244 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF790Q6PG37 636 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC16A9Q7RTY1 509 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 C5orf24Q7Z6I8 188 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SERPINA12Q8IW75 414 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 PEX5LQ8IYB4 626 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 GPC2Q8N158 579 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM89BQ8N5H3 189 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 STPG4Q8N801 248 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ARL10Q8N8L6 244 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CCDC63Q8NA47 563 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CLEC1AQ8NC01 280 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 KIAA0895Q8NCT3 520 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR13C3Q8NGS6 347 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 GATAD1Q8WUU5 269 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 APOBEC4Q8WW27 367 aaKnown RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 EEF2KMTQ96G04 330 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 NSL1Q96IY1 281 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 LURAP1Q96LR2 239 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 GAL3ST4Q96RP7 486 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 CTAGE1Q96RT6 745 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SPXQ9BT56 116 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC39A8Q9C0K1 460 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 WWTR1Q9GZV5 400 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 THAP9Q9H5L6 903 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP13A3Q9H7F0 1226 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 AKIRIN1Q9H9L7 192 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ECHDC1Q9NTX5 307 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRIM10Q9UDY6 481 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRMT6Q9UJA5 497 aaKnown RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 ELF5Q9UKW6 265 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 TNNQ9UQP3 1299 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 R4GN57 208 aa2.79□□□□□ -1.96
HMGB1P27-201ENST00000431429 GOLGA3Q08378 1498 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CNTLNQ9NXG0 1405 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 A0A087WUV0 522 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM129A0AVI4 362 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAGEB16A2A368 324 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 SMIM1B2RUZ4 78 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 C19orf81C9J6K1 198 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CACNB4O00305 520 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF197O14709 1029 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 TEX28O15482 410 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CIDEAO60543 219 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 SEC24AO95486 1093 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP1A1P05023 1023 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 EDN1P05305 212 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 ABHD2P08910 425 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 GOT1P17174 413 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CYP3A5P20815 502 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR1D2P34982 312 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAGEA11P43364 429 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CLK1P49759 484 aaKnown RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 NT5C2P49902 561 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 DNA2P51530 1060 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 LINC01547P58512 204 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 CSNK2BP67870 215 aa2.78□□□□□ -1.96
HMGB1P27-201ENST00000431429 FKBP1BP68106 108 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms