RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SPNS1Q9H2V7 528 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SEMA3GQ9NS98 782 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 C14orf105Q9NVL8 296 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SETXQ7Z333 2677 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 MKRN2OSH3BPM6 223 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 RFPL1O75677 317 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 UMODP07911 640 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 SERPINA6P08185 405 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 PLA2G2AP14555 144 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 EPB42P16452 691 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 MMP11P24347 488 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 HPDP32754 393 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 CASP2P42575 452 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 AGTR2P50052 363 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 VSNL1P62760 191 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 IRF8Q02556 426 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 PCDH1Q08174 1060 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 TBCCQ15814 346 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 HIST2H2ACQ16777 129 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 HIST2H2AA3Q6FI13 130 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ABHD13Q7L211 337 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 MRGPREQ86SM8 312 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ANKRD53Q8N9V6 530 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 OR9A4Q8NGU2 314 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ACMSDQ8TDX5 336 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 FER1L6-AS2Q96M78 137 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ING2Q9H160 280 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 SOX17Q9H6I2 414 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ACSS2Q9NR19 701 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 CPSF2Q9P2I0 782 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 MRPS2Q9Y399 296 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ANGPTL3Q9Y5C1 460 aa16.49■□□□□ 0.23
CTDSP1-203ENST00000431127 ARGFXA6NJG6 315 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 SMIM24O75264 130 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 ZIC2O95409 532 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 IL1RNP18510 177 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 PIK3CGP48736 1102 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 KLC1Q07866 573 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 ATP1A4Q13733 1029 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 DOC2AQ14183 400 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 NAA30Q147X3 362 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 PCBP2Q15366 365 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■□□ 18.1
CTDSP1-203ENST00000431127 EMBQ6PCB8 327 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 AFAP1L2Q8N4X5 818 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 ZCCHC10Q8TBK6 192 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 UBE2E3Q969T4 207 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 MOCOSQ96EN8 888 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 CRB3Q9BUF7 120 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 SEMA4CQ9C0C4 833 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 MRPL46Q9H2W6 279 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 ZNF358Q9NW07 568 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 ASB1Q9Y576 335 aa16.48■□□□□ 0.23
CTDSP1-203ENST00000431127 CFAP46Q8IYW2 2715 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 ANKDD1BA6NHY2 528 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 PCDH17O14917 1159 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 KLHL18O94889 574 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 SHBGP04278 402 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 ALOX12P18054 663 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 EPORP19235 508 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 IL10P22301 178 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 STXBP1P61764 594 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 CHIT1Q13231 466 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 E2F2Q14209 437 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 RASA2Q15283 850 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 RBBP7Q16576 425 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 VWA2Q5GFL6 755 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 SHISA6Q6ZSJ9 500 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 PPP1R32Q7Z5V6 425 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 TDRPQ86YL5 185 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■□□□ 13.4
CTDSP1-203ENST00000431127 TEX9Q8N6V9 391 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 CREB3L4Q8TEY5 395 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 SLC6A16Q9GZN6 736 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 SLC25A18Q9H1K4 315 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 CLK4Q9HAZ1 481 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 P4HTMQ9NXG6 502 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 XPR1Q9UBH6 696 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 TBK1Q9UHD2 729 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 C3orf18Q9UK00 162 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 G3BP2Q9UN86 482 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 NAALAD2Q9Y3Q0 740 aa16.47■□□□□ 0.23
CTDSP1-203ENST00000431127 PIEZO2Q9H5I5 2752 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 SGK494L7N484 410 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 AGPSO00116 658 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 STX16O14662 325 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 GALR3O60755 368 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 PRAMEF4O60810 478 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 CLEC3AO75596 197 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 WFS1O76024 890 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 TUBBP07437 444 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 GSTA1P08263 222 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 CYC1P08574 325 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 HSD17B3P37058 310 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 FOXL2P58012 376 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 PRAMEF9Q5VWM5 478 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 PRSS41Q7RTY9 318 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 PRSS58Q8IYP2 241 aa16.46■□□□□ 0.23
CTDSP1-203ENST00000431127 CLEC1AQ8NC01 280 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms