RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 ACAD11Q709F0 780 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 LARP4Q71RC2 724 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 VN1R4Q7Z5H5 301 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 SLITRK4Q8IW52 837 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 D2HGDHQ8N465 521 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 RERGQ96A58 199 aaPredicted RBP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 TM4SF19Q96DZ7 209 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 CMTM7Q96FZ5 175 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 MS4A8Q9BY19 250 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 TCF7L2Q9NQB0 619 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 TOR4AQ9NXH8 423 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 LOC105369274A0A096LPK9 316 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 LOC102723532A0A0G2JNH3 316 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 NPIPB8E9PQR5 432 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 H0YGG7 62 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 LSM1O15116 133 aaKnown RBP16.29■□□□□ 0.2
LINC00887-203ENST00000429578 HCRTR1O43613 425 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 RSL1D1O76021 490 aaKnown RBP16.29■□□□□ 0.2
LINC00887-203ENST00000429578 ETHE1O95571 254 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 PRR35P0CG20 571 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 GABRA4P48169 554 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 ARF3P61204 181 aaPredicted RBP16.29■□□□□ 0.2
LINC00887-203ENST00000429578 FOXC1Q12948 553 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 PWP1Q13610 501 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 CUL3Q13618 768 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 ASPGQ86U10 573 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 OR4N4Q8N0Y3 316 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 CEP70Q8NHQ1 597 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 SLC13A3Q8WWT9 602 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 CCDC74BQ96LY2 380 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 RILPQ96NA2 401 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 OR52B2Q96RD2 323 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 SERPINI1Q99574 410 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 AKTIPQ9H8T0 292 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 NMRK1Q9NWW6 199 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 VPS29Q9UBQ0 182 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 SLC12A4Q9UP95 1085 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
LINC00887-203ENST00000429578 NDUFS4O43181 175 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SERPIND1P05546 499 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SERPINA6P08185 405 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SLC35G6P0C7Q6 338 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 MSL3P1P0C860 447 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 TRA2AQ13595 282 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 NR6A1Q15406 480 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 LSM12Q3MHD2 195 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 ATP6AP1LQ52LC2 224 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 MCATQ8IVS2 390 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 CAMKVQ8NCB2 501 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 RCBTB1Q8NDN9 531 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 PPP3R2Q96LZ3 170 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 LRIT2A6NDA9 550 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 PEX11AO75192 247 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 CDK4P11802 303 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 HYAL2Q12891 473 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 TUBB3Q13509 450 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 DEFB110Q30KQ9 67 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 ADPRMQ3LIE5 342 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 GALNTL6Q49A17 601 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 CCDC157Q569K6 752 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SPDYAQ5MJ70 313 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 C6orf136Q5SQH8 315 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 PHF19Q5T6S3 580 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 KHDRBS2Q5VWX1 349 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 NXNQ6DKJ4 435 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 RBM44Q6ZP01 1051 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 CHSY3Q70JA7 882 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 ZNF655Q8N720 491 aaPredicted RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 NT5CQ8TCD5 201 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 METTL2AQ96IZ6 378 aaKnown RBP16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SLC6A16Q9GZN6 736 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 LRTM1Q9HBL6 345 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 ARL2BPQ9Y2Y0 163 aa16.28■□□□□ 0.2
LINC00887-203ENST00000429578 SH3BGRLO75368 114 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 LBPP18428 481 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 PDX1P52945 283 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 VSX2P58304 361 aaPredicted RBP16.27■□□□□ 0.19
LINC00887-203ENST00000429578 INSM1Q01101 510 aaPredicted RBP16.27■□□□□ 0.19
LINC00887-203ENST00000429578 RGS1Q08116 209 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 KCNAB1Q14722 419 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 AP5B1Q2VPB7 878 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 OGFOD2Q6N063 350 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 ZNF285Q96NJ3 590 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 TMEM74Q96NL1 305 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 MACROD1Q9BQ69 325 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 MRPL1Q9BYD6 325 aaKnown RBP16.27■□□□□ 0.19
LINC00887-203ENST00000429578 REXO4Q9GZR2 422 aaKnown RBP16.27■□□□□ 0.19
LINC00887-203ENST00000429578 C1orf109Q9NX04 203 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 GIMAP2Q9UG22 337 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 CROCCQ5TZA2 2017 aa16.27■□□□□ 0.19
LINC00887-203ENST00000429578 ZSCAN9O15535 394 aaPredicted RBP16.26■□□□□ 0.19
LINC00887-203ENST00000429578 P2RX6O15547 441 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms