RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RXRGP48443 463 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 CTBSQ01459 385 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 LCP2Q13094 533 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 TRAF3Q13114 568 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 DCP2Q8IU60 420 aaKnown RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 UBASH3BQ8TF42 649 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 IMP4Q96G21 291 aaKnown RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 CDK15Q96Q40 435 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 OR52E6Q96RD3 313 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 KCNA7Q96RP8 456 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 SLC28A1O00337 649 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 OR1I1O60431 355 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 MED26O95402 600 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 IMPDH1P20839 514 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 CD27P26842 260 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 POLR2JP52435 117 aaKnown RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 ID2Q02363 134 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 MRPL28Q13084 256 aaKnown RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 IRF4Q15306 451 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 ANGPT1Q15389 498 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 TTC23Q5W5X9 447 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 ABHD13Q7L211 337 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 OR9A1PQ8NGU1 263 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 PROX1Q92786 737 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 WDR12Q9GZL7 423 aaKnown RBP10.29□□□□□ -0.76
TCOF1-204ENST00000427724 MCCC2Q9HCC0 563 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 SH3BGRL2Q9UJC5 107 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 CARD8Q9Y2G2 431 aa10.29□□□□□ -0.76
TCOF1-204ENST00000427724 TMX2-CTNND1H3BSU7 103 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TIMP2P16035 220 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 PCSK6P29122 969 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 GGT5P36269 586 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CPOXP36551 454 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 MPLP40238 635 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 GRK6P43250 576 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CD97P48960 835 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 RUNX1T1Q06455 604 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 MTAPQ13126 283 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TGFBIQ15582 683 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 FGD3Q5JSP0 725 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 FRMD1Q8N878 549 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 FAM122AQ96E09 287 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 KCNS3Q9BQ31 491 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 KLHL20Q9Y2M5 609 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 RP1P56715 2156 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 COL11A2P13942 1736 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CENPXA8MT69 81 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ST13P50502 369 aaKnown RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 SCAPQ12770 1279 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 PPP1R8Q12972 351 aaKnown RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF423Q2M1K9 1284 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 LEXMQ3ZCV2 418 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 OGFRL1Q5TC84 451 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 AGBL5Q8NDL9 886 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 SUN5Q8TC36 379 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TRIM63Q969Q1 353 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ROPN1LQ96C74 230 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 EBPLQ9BY08 206 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 DEFB126Q9BYW3 111 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 GALPQ9UBC7 116 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 PRELID1Q9Y255 219 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TFECO14948 347 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 FHP07954 510 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 BPIP17213 487 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CD68P34810 354 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 RAB15P59190 212 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ACY1Q03154 408 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 HSPB3Q12988 150 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 SRSF5Q13243 272 aaKnown RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 PTCHD3Q3KNS1 767 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 SPANXN2Q5MJ10 180 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CPTPQ5TA50 214 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 DEPDC1Q5TB30 811 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 NADSYN1Q6IA69 706 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 P4HA3Q7Z4N8 544 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 PLA2G15Q8NCC3 412 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF248Q8NDW4 579 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 TMIEQ8NEW7 156 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 OR2A12Q8NGT7 310 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 HCAR2Q8TDS4 363 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 CENPIQ92674 756 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-204ENST00000427724 EPB41L1Q9H4G0 881 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 BTBD3Q9Y2F9 522 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 ANKRD31Q8N7Z5 1873 aa10.28□□□□□ -0.76
TCOF1-204ENST00000427724 NOTOA8MTQ0 251 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 AURKAO14965 403 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 FAM20BO75063 409 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 CYP4B1P13584 511 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 RRM2P31350 389 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 NRG3P56975 720 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 MTPNP58546 118 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 MERTKQ12866 999 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 KRR1Q13601 381 aaKnown RBP10.27□□□□□ -0.76
TCOF1-204ENST00000427724 GTF2H2Q13888 395 aa10.27□□□□□ -0.76
TCOF1-204ENST00000427724 MRPL58Q14197 206 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms